Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_021339.1 Length=51077 Score E Sequences producing significant alignments: (Bits) Value seq644464 367 4e-97 seq653325 174 5e-39 >seq644464 Length=2640 Score = 367 bits (406), Expect = 4e-97 Identities = 618/887 (70%), Gaps = 8/887 (1%) Strand=Plus/Minus Query 39090 GTGAGCGCAGCCGCCATGTACTCGGCCGGGTAGTGCGTCTTCAACCACGCCGTGCGGTAC 39149 |||||| || ||||| || || || || || |||| ||||| ||||||| | || Sbjct 2073 GTGAGCAATGCTGCCATATATTCTGCAGGATAATGCGCCTTCAGATACGCCGTCCAATAA 2014 Query 39150 GCGATGAGTCCGTACGCCGCCGAGTGCGCCTTGTTGAAGGCGTAGCCAGCGAAGGGGACC 39209 || | ||||| || |||||||| |||||||| || || || ||| ||| || | | Sbjct 2013 CTGAGCACACCGTAGGCTGCCGAGTGAGCCTTGTTAAACGCATAATCAGAGAACGGCAAC 1954 Query 39210 AGCACGTCCCACACTGCCTGGATGGCACCGTCCGAGTAGCCTCGCTCGCGCGCTCCCTTC 39269 || | |||||||| || || | || | || || | || | | || | || | Sbjct 1953 AGGATGTCCCACAGTGTCTTTACTGCGTCTTCAGAAAAACCATTCGTG-GCCATACCGGC 1895 Query 39270 TGGAAGTTCA-CGAACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATCGCCCGGCG 39328 || || ||| || ||| || | || | || ||| ||||| ||||| || || || Sbjct 1894 TGCAAAATCAGCGTACTGTTTATCGAGCTCTTCTTTCTTTTTCTTTCCCATTGCGCGCCG 1835 Query 39329 AAGCAGGTCGGCCTGACCCAGGGTGTACCCGGCCATGACCTGTGCAACCTTCTGCACCTG 39388 || | || || || || || | | | || || | |||||||| | | ||||| Sbjct 1834 CAGAATATCAGCTTGGCCGAGTGAGAATCCCGCTACCCGCTGTGCAATCGCCATAACCTG 1775 Query 39389 CTCCTGGTAGATGATCAACTGGAATGTCGGGTCCAGGATCTCCGACAGGGACTCGGCCAC 39448 |||||||| ||||| | | | | || | |||||||| || || | ||| |||| Sbjct 1774 TTCCTGGTAAATGATGAGCCCGTAGGTGGTATCCAGGATGTCTCGCAACGGCTCCGCCAG 1715 Query 39449 CTCGGGGTGGATCGGCGTGATCGCCTGCTGCCCGTTCTTCCGGAGGGCGTAGTTCGTGTG 39508 ||||| || ||||||||| | | || ||||| ||||| || || |||||||||||||| Sbjct 1714 TTCGGGATGAATCGGCGTGTTTTCTTGTTGCCCATTCTTGCGCAGCGCGTAGTTCGTGTG 1655 Query 39509 AGACCCCACGCCCATCGGACCCGGACGGTACAGCGCGACGACGGCTGAGATGTCCTCGAA 39568 || | | |||||||||||||| ||||||| ||||| || || || ||||||||||| Sbjct 1654 TGAATTCGCCCCCATCGGACCCGGTCGGTACAACGCGATAACCGCGGAAATGTCCTCGAA 1595 Query 39569 GTTGTCCGGCTTCAGCAGGCGGAGCAGTGAGCGCATCGCGCCGCCGTCGAGCTGGAAGAC 39628 | ||||||| |||| || || ||||||| ||||||| ||||||||||||||||| || Sbjct 1594 GGTGTCCGGTTTCAACAATCGCAGCAGTGCCCGCATCGGACCGCCGTCGAGCTGGAATAC 1535 Query 39629 CGAGAGCGTGTCGCCCCTGGCCAGCAGCTCGTAG--GTCGGGGCGTCGTCCAGAGGGATG 39686 ||| ||||| |||| ||| |||||| ||||| ||| || ||| ||||| | | Sbjct 1534 GCCGAGTGTGTCACCCCGGGCGAGCAGCGCGTAGGCGTCCGG--GTCATCCAGTGCCAGC 1477 Query 39687 TTCTCCAGGTCGACGTGCTCCCCACGGTT-GAGGCGGATGTTCTCGACCGCGTCGCCCAT 39745 | ||||| || |||| | ||||| ||||| | || |||| |||||| | || Sbjct 1476 TCTTCCAGCACGGGTCGCTCGCTGCGGTTGGAGGC-AACATTGTCGAGCGCGTCATCGAT 1418 Query 39746 GATCGTGAGGTTCCGGAGCCCGAGGAAGTCCATCTTCAGCAGGCCCAGAGCCTCGCAGCT 39805 ||||||||||| || |||||||| ||||||||||||| ||||| || |||||||| Sbjct 1417 AATCGTGAGGTTTCGCAGCCCGAGAAAGTCCATCTTCATAAGGCCGAGCGCCTCGCACGA 1358 Query 39806 CGGGTAGTCGAACTGCGTGATCGTCGCGCCGTCCTGCGGCCGAACCCACACCGGGATGTG 39865 ||| |||| ||||| |||| | ||||||||| ||| | | ||||||| Sbjct 1357 CGGAAAGTCAAACTGGGTGACGATTTGGCCGTCCTGTTCCCGTTTCATAATCGGGATGAT 1298 Query 39866 GTCGACCAGAGGCTCGTCGGACATGATCACACCGGCTGCGTGCACACCCATCTGCCGGAC 39925 ||| | || || || |||||||| |||||||| |||||||||||| ||| || Sbjct 1297 GTCAATGAGCGGATCACTCGACATGATGACACCGGCCGCGTGCACACCCCACTGTCGCTT 1238 Query 39926 GAGACCTTCGAGACCGAGCGCGGTGTCGATGACCTCCTTGGCGTCCG 39972 || ||| | || | |||||||| | ||| |||||| |||| Sbjct 1237 AAGGTTTTCTAACCCAACGGCGGTGTCAAACACCGTCTTGGCATCCG 1191 Score = 192 bits (212), Expect = 2e-44 Identities = 202/266 (76%), Gaps = 0/266 (0%) Strand=Plus/Minus Query 40224 ATGACCTCGCCACGACGCCGGTCATCGAAGTCGATGTCGACATCGGGCATGGACACGCGC 40283 || ||||| || || || || || || || |||| |||| |||||||| || || || Sbjct 993 ATAACCTCACCCCGTCGGCGCTCGTCAAAATCGACATCGAAGTCGGGCATTGAGACACGA 934 Query 40284 TCGGGGTTCAGGAAGCGCTCGAAGATGAGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATC 40343 || ||||| |||||||| ||||||||||| ||||| || |||||||||||||| |||||| Sbjct 933 TCCGGGTTGAGGAAGCGTTCGAAGATGAGACCGTGTTCAAGCGGGTCGAGGTCAGTGATC 874 Query 40344 CCGAGGACGTAGGCGACCAGCGAACCGGCCGCAGAGCCCCGCCCAGGGCCGACCCAGACC 40403 | | | |||| ||| ||| |||||||| |||| || || || ||||| || | | Sbjct 873 CGCATGGCGTACGCGGCCATTGAACCGGCACCAGACCCGCGGCCCGGGCCCACTCGAATT 814 Query 40404 CCGTTCTCCTTCGCCCAGCGGATGAAGTCCGCGACGACGAGGAAGTACGACGGGAACCCC 40463 || || | ||||| |||| ||||| |||||||| ||||||||||| ||||||||| Sbjct 813 CCATTGTTCTTCGACCAGTTAATGAAATCCGCGACAACGAGGAAGTAGCCGGGGAACCCC 754 Query 40464 ATCTGGATGATCATGTCGATCTCGTA 40489 ||||| |||| | || | |||||| Sbjct 753 ATCTGAGTGATGACCTCAACCTCGTA 728 >seq653325 Length=6560 Score = 174 bits (192), Expect = 5e-39 Identities = 183/241 (76%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 40251 AAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAAGCGCTCGAAGATG 40310 || |||||||||| || ||||| || || || ||||||||||||||||||||||| | Sbjct 1064 AAATCGATGTCGAAGTCCGGCATCGATACCCGTTCGGGGTTCAGGAAGCGCTCGAACAGC 1005 Query 40311 AGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACCG 40370 || || |||||||||||||||||||||||||| | | | ||||| |||||||| ||| Sbjct 1004 AGTTTGTATTCCAGCGGGTCGAGGTCGGTGATCCCCATGGCATAGGCCACCAGCGAGCCG 945 Query 40371 GCCGCAGAGCCCCGCCCAGGGCCGACCCAGACCCCGTTCTCCTTCGCCCAGCGGATGAAG 40430 || | || || ||||| || |||||| | || || | | | ||||| | |||||| Sbjct 944 GCGCCGGAACCGCGCCCCGGCCCGACCGGGCAGCCATTGTTCCTGGCCCACTGTATGAAG 885 Query 40431 TCCGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGATGATCATGTCGATCTCGTAC 40490 ||| |||||| |||||||| || || ||||||| || ||| | |||||||| || Sbjct 884 TCCCCGACGATCAGGAAGTAGCCCGCAAAGCCCATCTCGACGATGGTCCCGATCTCGAAC 825 Query 40491 T 40491 | Sbjct 824 T 824 Score = 118 bits (130), Expect = 3e-22 Identities = 204/293 (70%), Gaps = 4/293 (1%) Strand=Plus/Minus Query 39109 ACTCGGCCGGGTAGTGCGTCTTCAACCACGCCGTGCGGTACGCGATGAGTCCGTACGCCG 39168 ||||||||| ||| ||| ||||| ||| ||||| |||| || | || ||| || | Sbjct 2209 ACTCGGCCGTGTAATGCACCTTCAGCCAGCCCGTGTGGTAGGCCAGCAGGGAGTAAGCGG 2150 Query 39169 CCGAGTGCGCCTTGTTGAAGGCGTAGCCAGCGAAGGGGACCAGCACGTCCCACACTGCCT 39228 | | ||||| |||||||||| ||||||| || || ||| || ||| |||| | | Sbjct 2149 CAGCGTGCGACTTGTTGAAGCCGTAGCCGGCAAACTTCTCCATCAGGTCGAACACCTCGT 2090 Query 39229 -GGATGGCACC-GTCCGAGTAGCCTCGCTCGCGCGCTCCCTTCTGGAAGTTCACGAACTC 39286 || | | || | | |||| ||| || ||| ||||| ||||| | || | Sbjct 2089 CGGCTTTCTCCTGGCTGAGT--CCTTTTTCCGCCGCCCCCTTGCGGAAGATGGCGCGGTG 2032 Query 39287 CTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATCGCCCGGCGAAGCAGGTCGGCCTGACC 39346 || ||||| |||||| || ||||||||||| |||||||| |||| |||||| || Sbjct 2031 CTCGGCCATCTCCTCGGCTTTTTTCTTGCCCATGGCCCGGCGCAGCATGTCGGCGCCGCC 1972 Query 39347 CAGGGTGTACCCGGCCATGACCTGTGCAACCTTCTGCACCTGCTCCTGGTAGA 39399 |||| |||| ||| | | | ||| || || | ||||||||||||||||| Sbjct 1971 CAGGCTGTAGCCGCCGAGCAACTGGGCGGTCTGCATCACCTGCTCCTGGTAGA 1919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160106177254986