Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq586228 147 3e-29 seq649786 102 1e-15 seq644427 100 3e-15 seq613416 98.7 1e-14 seq657308 89.7 6e-12 >seq586228 Length=6479 Score = 147 bits (162), Expect = 3e-29 Identities = 301/433 (70%), Gaps = 17/433 (4%) Strand=Plus/Minus Query 1726733 CCGTCGGTGCCGTTCTTGAAGCCGATGGCCAGCGGCAGTGCC-GACGCCATCTCGCGGTG 1726791 ||||||||||||||||||||||| || | | || | | |||| || |||| ||||||||| Sbjct 2863 CCGTCGGTGCCGTTCTTGAAGCCTATCGGC-GCCGAAATGCCCGAGGCCAGCTCGCGGTG 2805 Query 1726792 CACCTGGCTCTCGGTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCAAATA 1726851 ||||||||| ||||| ||||| || || | ||||||||| | |||||| | | || Sbjct 2804 CACCTGGCTTTCGGTGGTGCGGGCACCGATGGCGCCCCAACTGATCAGGTCGCCGATGTA 2745 Query 1726852 -AGGGGCCACCAGAGGACTGAGAAACTCGACGGCCACGGGCTGATCGACGGCGACGACGA 1726910 ||||| | | | | |||||||||| | | ||||| | | |||| | || Sbjct 2744 CTGGGGCGAGATCACGTC-GAGAAACTCGCTGCCGGCGGGCATGCCCA-GGCG--GTTGA 2689 Query 1726911 GATCGCGCAACAGGCGGCGCGACGCCG-TCAGGCCGTCGGCCAGGCGGCACGACCCGTCG 1726969 ||| || ||| |||||| || | ||| || ||| | | |||| | | |||| Sbjct 2688 TTTCGATCAGCAGTTGGCGCG-CGATGCGCAGCCCCTCGTCGATGCGGTAGCTCTCGTCC 2630 Query 1726970 AGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAG 1727029 |||| ||||||| || ||| || ||||| ||||| || ||||||||||| |||| || Sbjct 2629 AGGTAGGGGTCGTTGATCAGCCCTTTCCAGCCGACCGTGGTGCGCGGCTTCTCGAAGTAC 2570 Query 1727030 GCGCGCATGACCACGCAAAGCGCGTCGCCG-ACCTCGTCTCGGACAAAGGCGCGCAGGCG 1727088 ||||||| || | || | | || || | | || ||| | ||| |||||| Sbjct 2569 ACGCGCATCACGATTTCCAGGGTGCCGGCGTAGCGGGT-GCGGGC---GGCCATCAGGCG 2514 Query 1727089 TCGGCCATAGTCGACGACGGCCGCCGGGTCGTGCGCCGAACACGGACCAACGATAACCAG 1727148 || | || |||||| |||||||||||||||| ||| || || | |||| |||| Sbjct 2513 GCGCGCGTACTCGACGGCGGCCGCCGGGTCGTGGATCGAGCAGGGGC---CGATCACCAT 2457 Query 1727149 CAGCCGCCGGTCG 1727161 |||| | || ||| Sbjct 2456 CAGCAGGCGATCG 2444 >seq649786 Length=1608 Score = 102 bits (112), Expect = 1e-15 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 869173 ATGCGAACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCC 869232 |||| | ||||||||||| ||||| ||| || |||| | ||| ||||| ||||| Sbjct 349 ATGCAAGCCTTCGTCGCGCGAGATCAATTCATTCGAAAAGCTCAAGCCCGGCATCAGGCC 408 Query 869233 GCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGC 869292 ||| ||||| ||||||||||||| ||| || |||||||| || || || || ||||| Sbjct 409 GCGTTTCTTCAGCCAAAAGATGGAGCAAAACGAACCCGAGAAGAAAATCCCTTCCACGGC 468 Query 869293 GGCAAAGCCGATGAGCCGCTC 869313 |||||| | || || ||||| Sbjct 469 GGCAAAAGCAATCAGACGCTC 489 >seq644427 Length=940 Score = 100 bits (110), Expect = 3e-15 Identities = 171/248 (69%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 ||||| || ||||| ||||| || ||| |||||||||||| | || |||||| || Sbjct 158 TGGTCTACATAGCGTGCCGTCATGTCAAAATTGCGGAGCATGGGGATGATGCCGTTAGAG 217 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185 |||| || ||| | ||||| ||| ||||||||| ||||| | |||||| Sbjct 218 GTGCCGCCCGTTCCCTTTATGTAGGAGCCTTTGGCGCGCACGTTGTGAATGCTCAAGCCG 277 Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245 | |||||| ||||| | ||| || ||| ||||| | ||||| || ||||| ||| Sbjct 278 ACGCCGCCCGCCGATTGGGAAATTTTGGCGGTTTGTTTTAAGGTGTCATAAATGCCGTCG 337 Query 1630246 ATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCG 1630305 || |||| ||||||| | ||| ||||| || |||||| | | |||||| Sbjct 338 ATGCTGTCGTCCTTCATCGTGAGGAGGAAGCAGCTTGAAAGTTGCGGCTTGGGCGTGCCC 397 Query 1630306 GCGTTGAA 1630313 || ||||| Sbjct 398 GCATTGAA 405 >seq613416 Length=25247 Score = 98.7 bits (108), Expect = 1e-14 Identities = 101/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 1627884 CACGCCGACGCCCATCGGCCGGTGGCGCAGGTTCGAGTGGCGGGCCTCGGGCACCGGGTA 1627943 ||| || | ||||| ||| ||||||||||||||||||| ||| |||| | |||| | ||| Sbjct 14316 CACACCCAGGCCCACCGGACGGTGGCGCAGGTTCGAGTCGCGCGCCTTGCGCACGGCGTA 14375 Query 1627944 GTGGTTGATGTCGATCACGCGGTTGAGGTTGCCCACCACGACCTGGACGATCTCGTGCAG 1628003 || |||||||||||||||| || ||| ||| || | | ||| || | ||| | |||| Sbjct 14376 GTAGTTGATGTCGATCACGTTGTCGAGCATGCGCATCGCCACCGTGATGGTCTGGCGCAG 14435 Query 1628004 GGCGCCGTGGTC 1628015 | ||||||| Sbjct 14436 TTTGTCGTGGTC 14447 >seq657308 Length=5575 Score = 89.7 bits (98), Expect = 6e-12 Identities = 125/171 (73%), Gaps = 6/171 (4%) Strand=Plus/Plus Query 344137 CGCGACGTCGGCGGCGCGGCGCGCGCCCTCCAAAGGGGCCAGTTGGTGGCCTTCCCCACC 344196 |||| | ||| || || || |||||||| | || ||| | || ||| | | |||||| Sbjct 4335 CGCGCCATCGCCGCAGCCGCCCGCGCCCTGCGCAGCGGCGCGCTGCTGGGCCTGCCCACC 4394 Query 344197 GAGACCGTCTACGGCCTCGGCGCCGACGCCACGTCTGACGAGGCCG-TGCGGCGC--ATC 344253 |||||||| |||||||| | || ||||| || | |||| |||| | ||||| ||| Sbjct 4395 GAGACCGTGTACGGCCTGGCGGCTGACGC--CGGC-AACGATGCCGCAGTGGCGCAAATC 4451 Query 344254 TTTGAGGTCAAGGGCCGACCCTCCAACAACCCGATCATTGTGCACGTGGCC 344304 |||| | ||||||||| ||| | || ||||| | || ||||| |||||| Sbjct 4452 TTTGCCGCCAAGGGCCGGCCCCGCGACCACCCGCTGATCGTGCATGTGGCC 4502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5970950642815059