Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq1659397 239 7e-58 seq323909 84.2 4e-11 >seq1659397 Length=2547 Score = 239 bits (264), Expect = 7e-58 Identities = 307/421 (73%), Gaps = 8/421 (2%) Strand=Plus/Plus Query 35431 CATGGCGTCACGCTTTCGGACGGGTCACACCCGTCTGGCCCTGGTATTTACCGCCGCGAT 35490 |||| | ||| || || || | ||||| || |||||||||||| || ||||| || | Sbjct 646 CATGTCCTCAAGCCTTGGGCAGCGTCACCCCGACCTGGCCCTGGTACTTGCCGCCACGGT 705 Query 35491 CCTTGTACGAGATTTCGCA------GTCCTCGTCACTCTCGAAAAACAGCATCTGCGCCA 35544 | ||| || ||||| |||| |||| |||||||| ||||||| |||||| Sbjct 706 CGCGGTAGCTGACCTCGCAAACGTCGTCCGCGTCGCTCTCGAAGAACAGCACCTGCGCGC 765 Query 35545 CACCTTCGTTCGCGTACACACGCGCCGGCAGGTTGGTAGTGTTGCTGAACTCCAGAGTCA 35604 |||||| || | | || || |||| | || |||||| ||||||||| |||| Sbjct 766 AGCCTTCGCCGGCATGGATGCGGGCGGGCAAGGGCGTGGTGTTGGAGAACTCCAGCGTCA 825 Query 35605 CATGACCTTCCCACTCAGGTTCCAGCGGCGTCACGTTGACGATGATACCACAGCGCGCGT 35664 || |||||||| || || || | || ||||||||||||||||| || ||||| || | Sbjct 826 CAAAGCCTTCCCATTCGGGCTCGAAGGGGGTCACGTTGACGATGATGCCGCAGCGGGCAT 885 Query 35665 AGGTGCTCTTACCCAAACACACCACGAGGACGTTGCGCGGAATGCGGAAGTATTCGACCG 35724 |||||||||| |||| || | || || |||||||||||||| ||||| ||||||| Sbjct 886 AGGTGCTCTTGCCCAGGCAGATGGTCAGCACATTGCGCGGAATGCGAAAGTACTCGACCG 945 Query 35725 TGCGTGCCAGAGCGAAGCTGTTCGGCGGAATCAGGATGCTGTCAGCC-TTAACCGGCTGC 35783 |||| ||||| ||||||||||| ||||| || | | ||||| || || | | Sbjct 946 TGCGGGCCAGCGCGAAGCTGTTGGGCGGGATGATGCAACTGTCGCCCGCGAAGTCGACG- 1004 Query 35784 AGGCACTTGGGATCGAAGTTCTTCGGATCAACCACTGCGCTGTTGATGTTGGTGAAGACT 35843 | || ||||| ||||||||||| || || | ||| | ||||| |||||||||||||||| Sbjct 1005 AAGCTCTTGGCGTCGAAGTTCTTGGGGTCGATCACCGTGCTGTGGATGTTGGTGAAGACT 1064 Query 35844 T 35844 | Sbjct 1065 T 1065 >seq323909 Length=4068 Score = 84.2 bits (92), Expect = 4e-11 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 122773 TTAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCAG 122832 ||||||||| ||||||||||||||||| |||||||||||||||| ||||| ||||| || Sbjct 3199 TTAGCTCAGCCGGTTAGAGCATCTGACTGTTAATCAGAGGGTCCTTGGTTCAAGTCCAAG 3140 Query 122833 A 122833 | Sbjct 3139 A 3139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 808783909633080