Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq649786 122 1e-21 seq586228 116 6e-20 seq657308 91.5 2e-12 seq127769 87.8 3e-11 seq613416 86.0 1e-10 >seq649786 Length=1608 Score = 122 bits (134), Expect = 1e-21 Identities = 216/323 (67%), Gaps = 17/323 (5%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 ||||||||||| ||||||||| || ||||| | ||| ||||| |||||||| ||| Sbjct 356 CCTTCGTCGCGCGAGATCAATTCATTCGAAAAGCTCAAGCCCGGCATCAGGCCGCGTTTC 415 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 || ||||||||||||| || || |||||||| || || || || ||||||||||| Sbjct 416 TTCAGCCAAAAGATGGAGCAAAACGAACCCGAGAAGAAAATCCCTTCCACGGCGGCAAAA 475 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 | | || ||||| || | |||||| Sbjct 476 GCAATCAGACGCTC-------TTG----------ANNNNNNNNNNNNNNNNAACGCCCAA 518 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580 || || || || |||| | || ||| || |||||| ||| || |||| ||||| Sbjct 519 TCGGCTTTCTTTTTCACGCATTCCATCGTTTCAATGGCGTGAAGCAGACGGTCTTTCTCC 578 Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640 || ||| || |||||||| || ||||| ||||| ||||| || |||||||| ||||| Sbjct 579 TGCGCGTCTTTCACGTAGGTATCAATGAGCAGCGAATAGGTTTCGGAGTGGATATTTTCA 638 Query 794641 ATGGCGATCTGGAAGCCATAAAA 794663 | ||| || |||||||| || || Sbjct 639 ACGGCAATTTGGAAGCCGTAGAA 661 >seq586228 Length=6479 Score = 116 bits (128), Expect = 6e-20 Identities = 218/314 (69%), Gaps = 11/314 (4%) Strand=Plus/Minus Query 2175076 TGCCGTCGGTGCCGTTTTTAAACCCGACCGGCAACGGCAGCGCCGACGCCATTTCGCGGT 2175135 |||||||||||||||| || || || | |||| || | |||| |||| ||||||| Sbjct 2865 TGCCGTCGGTGCCGTTCTTGAAGCCTATCGGCGCCGAAATGCCCGAGGCCAGCTCGCGGT 2806 Query 2175136 GCACCTGGCTCTCGGTGGTGCGCGCGCCCACGGCGCCCCACGCCACGAGGTCTGCCA--- 2175192 |||||||||| ||||||||||| || || | ||||||||| | ||||| | | Sbjct 2805 GCACCTGGCTTTCGGTGGTGCGGGCACCGATGGCGCCCCAACTGATCAGGTCGCCGATGT 2746 Query 2175193 AATAGGGCGCCACCAAAGGGCTGAGAAACTCGACAGCC-ACGGGCTGGCCGACGTCGACG 2175251 | | ||||| | || | |||||||||| | ||| ||||| ||| | | || | Sbjct 2745 ACTGGGGCGAGATCA---CGTCGAGAAACTCG-CTGCCGGCGGGCATGCCCA-GGCG--G 2693 Query 2175252 ACCAGGTCGCGCAGCAGTCGACGCGATGTGGCGAGGCCGGCGGCCAGGCGGCACGACCCG 2175311 | ||| ||||||| | |||| || || || || | | |||| | | || Sbjct 2692 TTGATTTCGATCAGCAGTTGGCGCGCGATGCGCAGCCCCTCGTCGATGCGGTAGCTCTCG 2633 Query 2175312 TCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACA 2175371 || |||| ||||||| || ||| || ||||| ||||| || ||||||||||| |||| Sbjct 2632 TCCAGGTAGGGGTCGTTGATCAGCCCTTTCCAGCCGACCGTGGTGCGCGGCTTCTCGAAG 2573 Query 2175372 TAGGCGCGCATGAC 2175385 || ||||||| || Sbjct 2572 TACACGCGCATCAC 2559 >seq657308 Length=5575 Score = 91.5 bits (100), Expect = 2e-12 Identities = 120/162 (74%), Gaps = 6/162 (4%) Strand=Plus/Plus Query 2233055 GCCGATGCGGCGCGTGCCCTCTGCCGCGGCGAGTTGGTCGCCTTTCCCACCGAGACCGTC 2233114 |||| || || || ||||| || |||||| | || | | | | |||||||||||||| Sbjct 4344 GCCGCAGCCGCCCGCGCCCTGCGCAGCGGCGCGCTGCTGGGCCTGCCCACCGAGACCGTG 4403 Query 2233115 TATGGCCTCGGCGCCGACGCGGCGTCAGACGAGGCCGTACAG-CGCA--TCTTTGACGCC 2233171 || ||||| | || ||||| || || |||| |||| | | |||| |||||| |||| Sbjct 4404 TACGGCCTGGCGGCTGACGC--CGGCA-ACGATGCCGCAGTGGCGCAAATCTTTGCCGCC 4460 Query 2233172 AAGGGCCGACCGTCCAACAACCCGATCATCGTGCACGTGGCC 2233213 |||||||| || | || ||||| | |||||||| |||||| Sbjct 4461 AAGGGCCGGCCCCGCGACCACCCGCTGATCGTGCATGTGGCC 4502 >seq127769 Length=1466 Score = 87.8 bits (96), Expect = 3e-11 Identities = 136/191 (71%), Gaps = 9/191 (5%) Strand=Plus/Plus Query 1485479 TGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGC 1485538 |||||||||| || || || | ||||| ||| ||||||| |||||| ||| || || | Sbjct 667 TGACGGCCTTTGTGCCTTCACACACGGCATGCATGGCCAGATCGCCGGGCAGGAGGAGCC 726 Query 1485539 GCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCCAGGC 1485598 | ||||| | ||||| |||||| | || || ||| ||| ||||||| ||| | Sbjct 727 GAACGGCCATTTGGATTTCGCGGCT--CGNACG----GCGGTTGC-AGTGCGC--CAGAC 777 Query 1485599 GGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACA 1485658 | | | ||||| | | ||||| |||| | ||| | | ||| |||||||||||||| Sbjct 778 GACTCGACTCGGCGGCTATGCGCTCGAAGACATCGCTCAGAAAACTGTTCATGATCGACA 837 Query 1485659 TCGATTTGTTG 1485669 | | |||| || Sbjct 838 TGGCTTTGCTG 848 >seq613416 Length=25247 Score = 86.0 bits (94), Expect = 1e-10 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 2070153 CACGCCGACGCCCATCGGCCGGTGGCGCAGGTTCGAGTGCCGGGCCTCGGGCACCGGGTA 2070212 ||| || | ||||| ||| ||||||||||||||||||| || |||| | |||| | ||| Sbjct 14316 CACACCCAGGCCCACCGGACGGTGGCGCAGGTTCGAGTCGCGCGCCTTGCGCACGGCGTA 14375 Query 2070213 GTGGTTGATGTCGATCACGCGGTTGAG 2070239 || |||||||||||||||| || ||| Sbjct 14376 GTAGTTGATGTCGATCACGTTGTCGAG 14402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7739714943907353