Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_022323.1 Length=136910 Score E Sequences producing significant alignments: (Bits) Value seq657315 123 2e-23 >seq657315 Length=21388 Score = 123 bits (136), Expect = 2e-23 Identities = 222/321 (69%), Gaps = 5/321 (2%) Strand=Plus/Minus Query 133609 CGAATTATTTCTAACCTATCCCTCATTAAGCCCAACCAAATGGAATGCTCCAGACTATCA 133668 || || || || | || ||| | ||| || |||||||| || ||||||||||| | ||| Sbjct 18888 CGGATAATCTCCAGCCGATCGCGCATCAACCCCAACCAGATCGAATGCTCCAGCCCATCG 18829 Query 133669 TCGTAGTGCTCAAAAGCCCTCCCGGTGTTGAATGGTGGGTCTATGTAAACACACTTCACT 133728 ||||| ||| ||| || || || |||||| | || ||||| ||| |||| || ||||| Sbjct 18828 TCGTAATGCGTAAAGGCACTGCCAGTGTTGTAAGGCGGGTCAATGAAAACGCATTTCACC 18769 Query 133729 TTGCCTGCGTACTCTTGCTCTAGCGCCTTCAATGCTAATAAGTTATCTCCAAAAATCAGC 133788 ||||| | | || ||| | |||||| | || | | |||||| || || || || Sbjct 18768 TTGCCAGAAAATTCCGCCTCCAACGCCTTGAGCGCCAGCAGGTTATCGCCGAAGATAAGG 18709 Query 133789 TTATTATCAAAAATATCGTTTTCGGTAACTC---TCTGGCTGTGGTAAGACTTACTC-GA 133844 ||||||||| ||||| || | ||| | || | ||| |||||||| ||| | Sbjct 18708 CGATTATCAAAGATATCAGCATCCGAAACCCGGTGCTTGGCGTGATAAGACTT-CTCTGT 18650 Query 133845 ATCTTCTAACAAAATGTGCGGCTCTAATTTTTTGCGCTCGTTTTTACCTATCCAGGTAAG 133904 ||||| | ||||||| ||||||| | || | | ||| || |||||||| || Sbjct 18649 GTCTTCCAGCAAAATGCGCGGCTCCAGCCGGGGCCGTTTTTCTTTGCCAATCCAGGTGAG 18590 Query 133905 TTCTAATTTGGTTTTGCTCAT 133925 ||| | ||| ||| ||||| Sbjct 18589 TTCGAGTTTTTGTTTACTCAT 18569 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 132634 GGGGCAAGTTTGTAATAACGGAAGCCACCACCACCTTGCCAGTTTACAGACTTAGAAATA 132693 || |||||||||||||| ||||| || ||||| ||||||||||| | || | | Sbjct 19758 GGTGCAAGTTTGTAATAGCGGAAACCGCCACCGCCTTGCCAGTTGGACGCCTGCGTCACC 19699 Query 132694 CCACCTTGATCTTCCCCATCGATCACTTTTTCCAAGCGCGGAATAATATGGGTATGGCAA 132753 || || | ||||| || ||||| || |||| || ||||| ||||| ||||| |||||| Sbjct 19698 CCGCCCTTGTCTTCACCGTCGATGACCTTTTTCAGACGCGGGATAATGTGGGTGTGGCAA 19639 Query 132754 TGATCACCAATCTCGATGGAGATCCAACGTCTTTTCATCTTGTGAGCTACAGCGGCAGTA 132813 || || || | ||| | |||||| || | ||| ||||| || || ||| | || Sbjct 19638 TGCTCGCCCAACTCAACCATGATCCAGCGGCGGCCCATTTTGTGGGCAACGGCGCCGGTG 19579 Query 132814 GTTCCCGAACCACCGAATGAATC 132836 || || || || |||| || || Sbjct 19578 GTGCCGGAGCCGGCGAAGGAGTC 19556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429128696319337