Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_022969.1 Length=76217 Score E Sequences producing significant alignments: (Bits) Value seq652898 297 9e-76 seq636339 105 3e-18 >seq652898 Length=17576 Score = 297 bits (328), Expect = 9e-76 Identities = 525/759 (69%), Gaps = 15/759 (2%) Strand=Plus/Plus Query 66122 CCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGG 66181 |||||||||| | | |||||| ||| |||||| | ||||| || | ||||||| Sbjct 16678 CCACCGGCTCGCTGGGCCTGGACATCGCGCTGGGCGTGGGGGGCCTGCCCCGTGGCCGGG 16737 Query 66182 TGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGG 66241 |||| |||||||| ||||| ||||| || || ||| | || ||| || || | | | | Sbjct 16738 TGGTTGAAATCTATGGCCCGGAATCCTCGGGCAAGACCACGCTGGCGCTGCAGGTGATCG 16797 Query 66242 CCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACC 66301 || | ||| ||| || |||| | ||||| | |||| || ||||| | |||||| Sbjct 16798 CCGAGATGCAAAAGCAGGGCGGCACCTGCGCCTTCGTCGATGCGGAGCATGCGCTGGACG 16857 Query 66302 CTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACA 66361 | ||||| | ||||| ||| | || | |||| || | ||||| |||| Sbjct 16858 TGCAATACGCGCAAAAACTCGGCGTGCAACTGTCCGACCTGCTGATCAGCCAGCCCGACA 16917 Query 66362 CTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCG 66421 | ||||| || || ||||||||||| ||| ||| || || |||| | | | | Sbjct 16918 CCGGCGAACAAGCGCTGGAGATCGTCGACAGCCTGGTGCGCTCCGGCGCGGTCGACCTGA 16977 Query 66422 TCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGG 66481 |||| || ||||| ||||| |||||| ||| ||||| ||||||||||||| || | Sbjct 16978 TCGTGGTGGACTCGGTGGCCGCCCTGACGCCCAAGGCCGAAATCGAAGGCGACATGGGCG 17037 Query 66482 ACAGTCACGTCGG-CCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGC 66540 || | | | ||| |||||| ||||| || ||| ||||| ||||||||||||||| Sbjct 17038 AC-GCCCTGCCGGGCCTGCAAGCGCGGCTGATGAGCCAGGCATTGCGCAAGCTCACCGCG 17096 Query 66541 ACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGC 66600 || ||| | |||||| || ||| |||||||| | ||| |||||||||| Sbjct 17097 ACGATCAAGAAGACCAACTGCATGGTCGTCTTCATCAACCAGATCCGCATGAAGATCGGC 17156 Query 66601 AACGTGGGCTACGGC----CCGAATGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTA 66656 ||| | |||| ||||| |||||||| |||||||| || | | |||||| Sbjct 17157 ---GTGATGTTCGGCAGCCCCGAA----ACCACCACCGGCGGCAATGCGCTCAAGTTCTA 17209 Query 66657 CGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGT 66716 |||||| || ||| |||| |||| |||| || |||| ||| | |||||||| || | Sbjct 17210 CGCCTCGGTGCGCCTGGACATCCGCCGCACCGGCACCATCAAGAAGGGCGATGAAGCCAT 17269 Query 66717 CGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGC 66776 |||||| ||| ||| ||||| ||||||||||| | ||||||| | | ||| Sbjct 17270 TGGCAACGAAACCAAGGTCAAGGTGGTCAAGAACAAAGTCAGCCCGCCGTTCAAGACCGC 17329 Query 66777 CGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGC 66836 ||||||| | || ||| || || |||||| || |||| |||| || ||||| ||| Sbjct 17330 CGAGTTCGACATCCTGTTTGGCGAAGGCATCAGCCGCGAGGGCGAAATCATCGACATGGG 17389 Query 66837 CGTG-TCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGT 66874 |||| ||| | | ||| | |||||||||||||||| Sbjct 17390 CGTGAACGCCAAG-ATCGTGGAAAAGTCGGGCGCCTGGT 17427 >seq636339 Length=1141 Score = 105 bits (116), Expect = 3e-18 Identities = 91/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 66428 TTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTC 66487 ||||||| ||||| ||||||||||| || ||| | |||||||| || ||||| || Sbjct 515 TTGACTCGGTGGCCGCCCTGGTGCCCAAGGCGGAGTTGGAAGGCGAGATGGGGGAAAGCA 456 Query 66488 ACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGC 66540 | | || |||| |||||||||||||||||||| ||||||||||||||||| Sbjct 455 AAATGGGGTTGCAGGCGCGCCTCATGTCGCAGGCGTTGCGCAAGCTCACCGGC 403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 238839241535566