Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq647165 102 6e-16 seq85824 95.1 9e-14 >seq647165 Length=2149 Score = 102 bits (112), Expect = 6e-16 Identities = 172/245 (70%), Gaps = 12/245 (5%) Strand=Plus/Plus Query 282608 TTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAA---A 282664 |||||| ||| ||| ||||| |||| || ||||| ||||| || ||| | | Sbjct 184 TTAATACCTTGAAA-GGCCAGAATTTAATGTCTGACTGAAC----TGAAGATTCATCCCA 238 Query 282665 TCTCT-ACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTG 282723 || | |||||| || || ||| ||||||| ||||| ||||| | | || Sbjct 239 TCGCCGACCAATCAAACGCTTTATGTCAAAAACCGTATTTTCCGGATTCGAGGTAAGCTG 298 Query 282724 ATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTG---TAAATGAAACATATGATGG 282780 | ||||| ||||||||||||||| ||||| ||||| | || | ||| ||||| || Sbjct 299 GTTCTTGGCAGCATCTCCAATCAGACGTTCTCCCTCTGGTGTGAAGGCAACGTATGACGG 358 Query 282781 AGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACC 282840 || ||||||| ||||||||||| ||||| || || || |||||||| ||||||| Sbjct 359 TGTAATGCGATTGCCTTGATCATTGGCAATTATCTCGACACGACCATTTTTGTATACACC 418 Query 282841 TACAC 282845 |||| Sbjct 419 AACAC 423 >seq85824 Length=5709 Score = 95.1 bits (104), Expect = 9e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 282368 GGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCT 282427 || |||||||| || | || || || || || ||||| || ||||||||||| || Sbjct 1309 GGCTCATTAATGATGCGCATGACGTTTAGGCCTGCAATGACGCCAGCATCTTTAGTTGCC 1250 Query 282428 TGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTT 282487 ||||| || | |||||| || ||||| |||||||| | ||| |||| ||| || | ||| Sbjct 1249 TGTCTCTGAGCATCGTTGAAGTATGCTGGAACAGTTACAACAGCATGTGTCACCTTTTTG 1190 Query 282488 CCAATATAAGCGCTTGCTGTTTGTTTCATTTT 282519 |||| ||||| ||| || | |||||||| Sbjct 1189 CCAAGGTAAGCCTCTGCAGTCTCCTTCATTTT 1158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3659154637461102