Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_023696.1 Length=157568 Score E Sequences producing significant alignments: (Bits) Value seq653325 82.4 8e-11 >seq653325 Length=6560 Score = 82.4 bits (90), Expect = 8e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 118170 CTGCCTGTGCGGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGG 118229 ||||| | ||| ||||| || || |||| || ||||||||||| |||| | |||||| Sbjct 912 CTGCCCGGTCGGGCCGGGGCGCGGTTCCGGCGCCGGCTCGCTGGTGGCCTATGCCATGGG 971 Query 118230 CATCACCTCGATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTTATCAACCCGGA 118289 |||||| |||||||| | | ||| | ||| ||||||||||||| | ||||| || Sbjct 972 GATCACCGACCTCGACCCGCTGGAATACAAACTGCTGTTCGAGCGCTTCCTGAACCCCGA 1031 Query 118290 CCG 118292 || Sbjct 1032 ACG 1034 Score = 82.4 bits (90), Expect = 8e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 119233 ACCTACGGCATCCTGGTCTACCAGGAGCAGCTGATCCGCACCGCCAAGGAGCTGGCCGGG 119292 |||||||| ||| ||||||||||||||||| |||| | |||||| || ||| | ||| Sbjct 1903 ACCTACGGGATCATGGTCTACCAGGAGCAGGTGATGCAGACCGCCCAGTTGCTCGGCGGC 1962 Query 119293 TTCACCCCGGGCGAGGCCGAGCGGCTGCGTAAGGGCATCGGCAAGAAGAA 119342 | || || ||||| ||||| |||||| || ||| |||||||| || Sbjct 1963 TACAGCCTGGGCGGCGCCGACATGCTGCGCCGGGCCATGGGCAAGAAAAA 2012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 493632721229760