Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_024134.1 Length=139020 Score E Sequences producing significant alignments: (Bits) Value seq657315 120 3e-22 >seq657315 Length=21388 Score = 120 bits (132), Expect = 3e-22 Identities = 221/321 (69%), Gaps = 5/321 (2%) Strand=Plus/Minus Query 135719 CGAATTATTTCTAACCTATCCCTCATTAAGCCCAGCCAAATGGAATGCTCCAGGCTATCA 135778 || || || || | || ||| | ||| || |||| ||| || ||||||||||| | ||| Sbjct 18888 CGGATAATCTCCAGCCGATCGCGCATCAACCCCAACCAGATCGAATGCTCCAGCCCATCG 18829 Query 135779 TCGTAGTGCTCAAAAGCCCTTCCGGTATTGAATGGTGGGTCGATGTAAACACACTTCACT 135838 ||||| ||| ||| || || || || ||| | || ||||| ||| |||| || ||||| Sbjct 18828 TCGTAATGCGTAAAGGCACTGCCAGTGTTGTAAGGCGGGTCAATGAAAACGCATTTCACC 18769 Query 135839 TTGCCTGTATACTCTTGCTCTAGCGCCTTCAATGCTAATAAGTTATCTCCAAAAATCAGT 135898 ||||| | | | || ||| | |||||| | || | | |||||| || || || || Sbjct 18768 TTGCCAGAAAATTCCGCCTCCAACGCCTTGAGCGCCAGCAGGTTATCGCCGAAGATAAGG 18709 Query 135899 TTATTATCAAAAATATCGTTTTCGGTCAC---TTTCTGGCTGCGGTAAGACTTGCTC-GA 135954 ||||||||| ||||| || | || | || | | | |||||||| ||| | Sbjct 18708 CGATTATCAAAGATATCAGCATCCGAAACCCGGTGCTTGGCGTGATAAGACTT-CTCTGT 18650 Query 135955 ATCTTCTAACAAAATGTGCGGCTCTAGCTTTTTGCGCTCGTTTTTACCTATCCAGGTAAG 136014 ||||| | ||||||| ||||||| ||| || | | ||| || |||||||| || Sbjct 18649 GTCTTCCAGCAAAATGCGCGGCTCCAGCCGGGGCCGTTTTTCTTTGCCAATCCAGGTGAG 18590 Query 136015 TTCTAATTTAGTTTTGCTCAT 136035 ||| | ||| ||| ||||| Sbjct 18589 TTCGAGTTTTTGTTTACTCAT 18569 Score = 100 bits (110), Expect = 2e-16 Identities = 143/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 134749 AAGTTTGTAATAGCGGAAGCCACCACCACCTTGCCAGTTTACAGACTTAGAAATACC-CC 134807 |||||||||||||||||| || ||||| ||||||||||| | || | | || || Sbjct 19753 AAGTTTGTAATAGCGGAAACCGCCACCGCCTTGCCAGTTGGACGCCTGCGTCACCCCGCC 19694 Query 134808 CTTGATCTTCACCATCGATCACTTTTTCCAAGCGCGGAATAATATGGGTATGACAATGAT 134867 |||| |||||||| ||||| || |||| || ||||| ||||| ||||| || ||||| | Sbjct 19693 CTTG-TCTTCACCGTCGATGACCTTTTTCAGACGCGGGATAATGTGGGTGTGGCAATGCT 19635 Query 134868 CACCTAGCTCGATTGAGATCCAACGTCTTTTCATCTTGTGAGCTACAGCAGCAGTAGTTC 134927 | || | ||| | |||||| || | ||| ||||| || || || | || || | Sbjct 19634 CGCCCAACTCAACCATGATCCAGCGGCGGCCCATTTTGTGGGCAACGGCGCCGGTGGTGC 19575 Query 134928 CCGAACCACCGAATGAATC 134946 | || || |||| || || Sbjct 19574 CGGAGCCGGCGAAGGAGTC 19556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 435510357501600