Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq688975 84.2 3e-11 >seq688975 Length=100 Score = 84.2 bits (92), Expect = 3e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 8659 CCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCC 8718 |||||||||||||||||| ||||| ||| ||||| | ||| |||||||||||| ||||| Sbjct 1 CCTCGTTAGTATAGTGGTGAGTATCCCCCCCTGTCACGCGGTAGACCGGGGTTCAATTCC 60 Query 8719 CCGACG 8724 |||||| Sbjct 61 CCGACG 66 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/72 (86%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11731 CCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCC 11789 |||||||||||||||||| ||||| ||| ||||| | ||| |||||||||||| ||||| Sbjct 1 CCTCGTTAGTATAGTGGTGAGTATCCCCCCCTGTCACGCGGTAGACCGGGGTTCAATTCC 60 Query 11790 CCGACGAGGAGG 11801 |||||| | ||| Sbjct 61 CCGACGGGAAGG 72 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 639302130344880