Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq533080 104 5e-17 >seq533080 Length=1015 Score = 104 bits (114), Expect = 5e-17 Identities = 138/189 (73%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 110743 AGAGAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCT 110802 ||||| ||| | ||||| || || || ||||| |||||| | || || ||||| || Sbjct 788 AGAGACCTGGTGCTTTTGCCATTTACCTGGAACCATGGCATGCCGACATCTTTGACTTTC 729 Query 110803 TAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAA 110862 | || ||| |||||| ||| ||||| || ||||||| || |||| |||||| Sbjct 728 TGGATTGTCGGAAAAATACAGGCAAGGAAGAGCAGCGAGCACGAGACCTATTCTATGCAC 669 Query 110863 TGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAA-AATGGCATGTGGTCTCTTATG 110921 | |||||| |||||||||||||||| || || | ||| ||||| ||| | || ||| Sbjct 668 TATGGATTCCAGATTTATTCATGAAGCGAGT-CGAGAGCAATGGTGACTGGACACTGATG 610 Query 110922 TGTCCTCAT 110930 ||||||||| Sbjct 609 TGTCCTCAT 601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1161577967716447