Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_024792.1 Length=160281 Score E Sequences producing significant alignments: (Bits) Value seq439340 87.8 2e-12 seq573518 84.2 2e-11 >seq439340 Length=4976 Score = 87.8 bits (96), Expect = 2e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 132300 TGGACTGAGAAGGATTCGAACCTCCGACACAGGGATTTTCAGCCCCCTGCTCTACCAACT 132359 ||| ||| | ||| ||||||| |||||||| |||||||||| || |||||||||| ||| Sbjct 1021 TGGCCTGGGGCGGAATCGAACCACCGACACAAGGATTTTCAGTCCTCTGCTCTACCGACT 1080 Query 132360 GAGCTACCAGTCCAAGGC 132377 |||||||| | ||||||| Sbjct 1081 GAGCTACCGGGCCAAGGC 1098 >seq573518 Length=6297 Score = 84.2 bits (92), Expect = 2e-11 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 129930 AGGACTCGAACCTGTAACCTTCGGTTTTGGAGACCGACGCTCTACCAGTTGAGCTAGACC 129989 |||| |||||||| |||||||||||||||||||||||||||| ||| |||||||| ||| Sbjct 6190 AGGAATCGAACCTACAACCTTCGGTTTTGGAGACCGACGCTCTGCCAATTGAGCTATACC 6249 Query 129990 C 129990 | Sbjct 6250 C 6250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 502134229359720