Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_025115.1 Length=40002 Score E Sequences producing significant alignments: (Bits) Value seq1658887 114 3e-21 seq674120 95.1 3e-15 seq514247 84.2 5e-12 >seq1658887 Length=1336 Score = 114 bits (126), Expect = 3e-21 Identities = 279/410 (68%), Gaps = 12/410 (3%) Strand=Plus/Minus Query 18142 GCATCCACGCCAATGTGCGCTTTCATTCCGAAATGCCACTGGTTACCTTTCTTGGTCTGG 18201 ||||| || |||||||| || ||||| || || |||||||| || |||||||||||||| Sbjct 626 GCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGA 567 Query 18202 TGCATCTCGGGGTCGCGCTTGCCGCT-GCCATTCTTGGTCGAGCTGGGCGCGGCAATCAG 18260 |||||||| || ||||| |||| ||| |||||||| |||||||| || |||| | Sbjct 566 TGCATCTCCGGATCGCG-TTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGAT 508 Query 18261 CGAGGCGTCGACCACCGTGCCCTCTTTGAGCAGGTAGCC--CTTCGCACTGAGTTGCGCG 18318 | ||| || |||| ||||| | | | || | ||| ||||| | | ||| Sbjct 507 GGTGGCATCCACCAAAGTGCCTTGGGTCATCATGACGCCTGCTTCGGCCAG-CCAGCG-A 450 Query 18319 TTGACCGTCTGCAGAAATTGCTCGGCCAGTTGGTGTCGCTCCAGCAAGTGCCGAAAGCGC 18378 |||| |||| | ||||| ||||||||| || |||| |||| ||| || || | Sbjct 449 TTGATGGTCTTGAACAATTGACGGGCCAGTTGATGCTGCTCGAGCAGGTGGCGGAAATTC 390 Query 18379 AGAATGCTGACCCGGTCCGGCAGTCGGCTTATGC-CTCCCAGCCCCGCGAATTGCCG-AT 18436 | ||| || || |||||||| || ||| | | | || || | || || Sbjct 389 ATGATGGTGGTGCGATCCGGCAGGGCGC-TATCCAGGGATAATCGGGCAAACAGGCGCAT 331 Query 18437 ACAACGGC-ACGTCGTACAGCGCCTCTTCCATCGCCACGTCCGTCAGCCCGAACCATTGC 18495 | ||| | |||||||| || |||||||| || |||| |||| | |||| ||| Sbjct 330 GGA--GGCGATTTCGTACAGGGCATCTTCCATGGCACCGTCGCTCAGGTTGTACCAATGC 273 Query 18496 TGCAGAAAGTGGATGCGCAGCATCGTTTCGACTGGAAACGGCTTCCGACC 18545 |||| |||| || |||||||| || || | ||| | ||| ||| || Sbjct 272 TGCATGCAGTGAATACGCAGCATGGTCTCCAGCGGATAAGGCCGCCGGCC 223 >seq674120 Length=100 Score = 95.1 bits (104), Expect = 3e-15 Identities = 79/97 (81%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 25108 ACCACGCTGGTTCACCGCGACGGCTACCGCTTCTGGGGCTCGCGCACGTGCAGCGCGGAT 25167 ||||| || ||| |||| |||||| ||||||||||||| ||||| ||||||| || Sbjct 4 ACCACCCTCATTCGCCGCAACGGCTTCCGCTTCTGGGGCAACCGCACCTGCAGCGACGAC 63 Query 25168 CCGCTGTTCGCCTTCGAGAACTACACCCGCACCGCCC 25204 ||| || || ||||||||||||||||||||||||| Sbjct 64 CCGGCATTTGCGTTCGAGAACTACACCCGCACCGCCC 100 >seq514247 Length=12388 Score = 84.2 bits (92), Expect = 5e-12 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 18145 TCCACGCCAATGTGCGCTTTCATTCCGAAATGCCACTGGTTACCTTTCTTGGTCTGGTGC 18204 || ||||| |||||| ||||| ||||| | |||||| | ||| || |||||||||| Sbjct 4396 TCTACGCCGATGTGCAGCTTCATGCCGAAGTACCACTGCTGACCCTTGCAGGTCTGGTGC 4337 Query 18205 ATCTCGGGGTCGCGCTTGCCGCTGCCATTCTTGGTCGAGCTGGGCGCGG 18253 ||||| || ||||||| ||| | ||||||||||||| | |||||| Sbjct 4336 ATCTCCGGATCGCGCTCGCCCTCGGCATTCTTGGTCGACGAGAGCGCGG 4288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125364589192936