Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_025431.1 Length=45718 Score E Sequences producing significant alignments: (Bits) Value seq638679 107 5e-19 >seq638679 Length=4566 Score = 107 bits (118), Expect = 5e-19 Identities = 315/481 (65%), Gaps = 11/481 (2%) Strand=Plus/Minus Query 7916 GCTTCGCGACGGTTCTGGCTGATCCTCCTTGGCGCTTTCAGAACAGCACAGGCAAAGTTG 7975 ||||| ||| |||| || ||||| || |||||||| |||||| || || || || | Sbjct 1286 GCTTCAAGACAATTCTCGCCGATCCGCCGTGGCGCTTCGCGAACAGAACGGGTAAGGTCG 1227 Query 7976 CACCAGAGCACCGTCGCCTTAGCCGCTATGGCACGTTGTCGCTTCCAGAGATCGAGGCGT 8035 | || || || || || || || || |||| || | || | ||| || Sbjct 1226 CCCCGGAACATCGACGGCTCGAACGATACTCCACGATGACCCTCGACGCTATCAAGCAAC 1167 Query 8036 TGCCAGTTGCGGAGATCGTAA--AAGAGCCAT-CTCATCTTTATCTATGGGTACCGAACG 8092 |||| || || || |||| |||| || | || || || || ||||| ||||| | Sbjct 1166 TGCCCGTGGCCGATATCGCTGCGAAGA---ATGCGCACCTGTACCTGTGGGTCCCGAATG 1110 Query 8093 CCCTCCTGGCGGAAGGACTGTCCGTGATGGCGGCGTGGGGCTTCACATACAAATCGAACA 8152 | || ||| | || || || |||| |||| |||||||||||| |||| || || Sbjct 1109 CGCTTCTGCCTGAGGGCATGGCCGTCATGGAGGCGTGGGGCTTTCGATACGTGTCAAATG 1050 Query 8153 TCGTGTGGCACAAAATCCGCAAAGACGGCGGGTCAGACGGTCGCGGCGTCGGCTTTTATT 8212 |||| ||| |||| || | || |||||| | ||||| || || ||||| || |||| Sbjct 1049 TCGTCTGGGCCAAACGTCGGATTGATGGCGGGCCGGACGGGCGTGGTGTCGGTTTCTATT 990 Query 8213 TCCGGAATGTGACCGAGATTATCCTGTTTGG-GACAAAGGGAAAAAACGCCAGAACACTC 8271 |||| || || || ||| | || | || || | || || | ||| || || Sbjct 989 TCCGCAACGTTACGGAGTTGATTTTATTCGGCGTTCGCGGCAACATGCGC----ACCCTT 934 Query 8272 GCACCCGGTCGCACCCAAGTGAACTACATCTCTTCGCAGAAGCGGGAGCACTCACGCAAA 8331 |||| ||| | || || ||| ||| || | ||||| || ||||| || || Sbjct 933 CAGCCCGCGCGCTCACAGGTCAACATGATCGAGTCTCGCAAGCGTGAACACTCGCGTAAG 874 Query 8332 CCAGATGAACTTTATCCAATCATCGAAGCGTGTTCGTCAGGCCCGTATCTGGAACTTTTT 8391 || ||||| | || || | |||||||| ||||| | || |||| ||| ||| | ||| Sbjct 873 CCCGATGAGCAGTACCCGTTTATCGAAGCATGTTCTCCGGGGCCGTTTCTCGAAATGTTT 814 Query 8392 G 8392 | Sbjct 813 G 813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143295326652320