Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq649786 161 1e-33 seq586228 118 1e-20 >seq649786 Length=1608 Score = 161 bits (178), Expect = 1e-33 Identities = 299/442 (68%), Gaps = 19/442 (4%) Strand=Plus/Minus Query 1455871 ACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATC 1455930 |||| ||||| ||||| |||| |||||| | || |||||| ||||||||||| || || Sbjct 780 ACGATGAGCGACATTTTATCACGCACGTTTTGGCGTTTTTT-GCCGCCAGCGACGGAATT 722 Query 1455931 GTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTG 1455990 || ||| || ||||| | | ||| || || || |||| | || || || Sbjct 721 GTAAACGAAAATCTGGCGGAACATTTTGTGTCGGAAGTGCAATATACGGAAGCTAAATTT 662 Query 1455991 TTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATC 1456050 || ||||| ||||| || ||| | ||||| |||||||| |||||||| ||||| || || Sbjct 661 TTCTACGGCTTCCAAATTGCCGTTGAAAATATCCACTCCGAAACCTATTCGCTGCTCATT 602 Query 1456051 GACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTG 1456110 || |||||||| || ||| || ||||| |||| || ||| |||||| || ||| || Sbjct 601 GATACCTACGTGAAAGACGCGCAGGAGAAAGACCGTCTGCTTCACGCCATTGAAACGATG 542 Query 1456111 CCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGAC 1456170 | |||| || || ||||| |||||| | || | Sbjct 541 GAATGCGTGAAAAAGAAAGCCGATTGGGCGTT-------NNNNNNNNNNNNNNNNTCAA- 490 Query 1456171 ACTTTGCCGAGCGGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTT 1456229 ||||| || | | ||||||| ||| || || || || |||||||| | Sbjct 489 --------GAGCGTCTGATTGCTTTTGCCGCCGTGGAAGGGATTTTCTTCTCGGGTTCGT 438 Query 1456230 TCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAAC 1456289 | ||| ||||||||||||| ||||| |||||||| ||| |||| ||| ||||| || Sbjct 437 TTTGCTCCATCTTTTGGCTGAAGAAACGCGGCCTGATG-CCGGGCTTGAGCTTTTCGAAT 379 Query 1456290 GAATTTATCAGTCGCGACGAAG 1456311 ||||| ||| |||||||||| Sbjct 378 GAATTGATCTCGCGCGACGAAG 357 >seq586228 Length=6479 Score = 118 bits (130), Expect = 1e-20 Identities = 218/312 (70%), Gaps = 7/312 (2%) Strand=Plus/Plus Query 165555 GTCATGCGCGCCTATGTCGAAAAGCCGCGCACGACCGTTGGATGGAAGGGCCTGGCCAGT 165614 || ||||||| || |||| ||||||||||| || || || ||||| || ||| || Sbjct 2559 GTGATGCGCGTGTACTTCGAGAAGCCGCGCACCACGGTCGGCTGGAAAGGGCTGATCAAC 2618 Query 165615 GACCCCGATCTTGATGGCTCGTGCCGCCTGGCTGATGGCCTTGATACATCGCGCCGCCTG 165674 |||||| | || || | | |||| | | || || || |||||||| ||| Sbjct 2619 GACCCCTACCTGGACGAGAGCTACCGCATCGACGAGGGGCTGCG--CATCGCGC-GCCAA 2675 Query 165675 CTGCGTGATCTCG-TCGTCGACGTCGACCAACCCGTGGCCGTCGAGTTTCTCAGTCCTCT 165733 |||| ||||| || | | | | | |||| | | |||||||||| | | | Sbjct 2676 CTGC-TGATCGAAATCAACCGCCTGGGCATGCCCGCCGGCAGCGAGTTTCTC-GACGTGA 2733 Query 165734 GGTGGCCCCC-TATTTGGCAGACCTGGTCACGTGGGGCGCCGTCGGTGCGCGCACCACCG 165792 | ||||| || | | |||||| ||| ||||||||| ||||||| |||||||||| Sbjct 2734 TCTCGCCCCAGTACATCGGCGACCTGATCAGTTGGGGCGCCATCGGTGCCCGCACCACCG 2793 Query 165793 AGAGCCAGGTGCACCGCGAGATGGCGTCGGCGCTGCCGCTGCCCATTGGCTTCAAAAACA 165852 | |||||||||||||||||| |||| |||| | || ||| || |||||||| ||| Sbjct 2794 AAAGCCAGGTGCACCGCGAGCTGGCCTCGGGCATTTCGGCGCCGATAGGCTTCAAGAACG 2853 Query 165853 GCACCGACGGCA 165864 |||||||||||| Sbjct 2854 GCACCGACGGCA 2865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7017746770639374