Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_026594.1 Length=56537 Score E Sequences producing significant alignments: (Bits) Value seq463370 102 3e-17 seq532148 96.9 1e-15 >seq463370 Length=6732 Score = 102 bits (112), Expect = 3e-17 Identities = 277/419 (66%), Gaps = 10/419 (2%) Strand=Plus/Minus Query 36715 GGCCCTGCGGGCACCGGGAAGACCTTCCTGGCCATTCACCACGGACTGCGCCTGCTGGAG 36774 ||||| || |||||||| || ||||| |||||| | | || || | ||| ||| Sbjct 910 GGCCCGGCCGGCACCGGCAAAACCTTTCTGGCCGTGGCCTGCGCCGTGGACGCGCTCGAG 851 Query 36775 GCCAAGGAAATCCAGCGACTCGTCATCACTCGCCCCGCCGTCGAGGCCGAGGAGAAGCTC 36834 || | | ||||| |||| | || ||||||||||||||||||| ||| || Sbjct 850 CGCAGCGCCGTGCAGCGCATCGTGCTGACCCGCCCCGCCGTCGAGGCCGGCGAGCGCCTG 791 Query 36835 GGCTACCTGCCCGGCGGCATCGAAGAGAAGATGGCTCCGTACCTGATCCCGATGCTGGAC 36894 |||| |||||||||| | | | | ||| | | || |||||| |||| || ||| Sbjct 790 GGCTTTCTGCCCGGCGACCTGGCGCAAAAGGTCGACCCCTACCTGCGCCCGCTGTACGAC 731 Query 36895 GCGGTGATCGACCTGGTTGGCC-CGACGATGGCCAA---GCGCCTGCAGGAGACCCGCCA 36950 ||| | || ||| | ||| |||| | | ||| ||| || | | || ||| Sbjct 730 GCGCTCTATGAACTGATGGGCTACGACAAGGTGCAAAAAGCGTTTGAACGCAACGCGC-- 673 Query 36951 GCTCGAGATCGCCCCGCTGGCCTACATGCGAGGCCGAACCTTCAACGACACGTTCCTCAT 37010 | || |||||||||||||||| |||||| || || || | ||| || | ||| | || Sbjct 672 --TGGAAATCGCCCCGCTGGCCTTCATGCGCGGACGCACGCTGAACAACGCCTTCGTGAT 615 Query 37011 CGCCGACGAGATGCAGAACGCCAC-CCCGCGACAGGCCGCGCTGCTGGTGACCCGCCTGG 37069 | |||||| |||||| |||| |||| | ||| | || | | |||||| | | Sbjct 614 CCTCGACGAAGCCCAGAACACCACGCCCGAG-CAGATGAAGATGTTCCTCACCCGCATCG 556 Query 37070 GCTTCGGAACGCGGGCCGTCTTGAACGGTGACCCGGCCCAGTGCGACCTCCCGGCGGGC 37128 |||| || | ||||||| | | ||| ||| | |||| |||||| || ||||| Sbjct 555 GCTTTGGCGCCAAGGCCGTCGTCACCGGCGACGTGAGCCAGATCGACCTGCCCCCGGGC 497 >seq532148 Length=3883 Score = 96.9 bits (106), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 3/197 (2%) Strand=Plus/Minus Query 29042 CGCTGGAACCCTGGCAAGCCGATCGAAGCCGGTGCCTGGGCCACGCACTTCATCGAGGAC 29101 |||| ||||| |||||||||||||| ||| || |||||||||| |||| |||| Sbjct 2322 CGCTACAACCCCGGCAAGCCGATCGAGCTCGGCGCGCTGGCCACGCACCACATCCTGGAC 2263 Query 29102 GCGGACGTCGCCAACGAGCGCCCCTCCTCCGAGTTCGCCCTGCCCTCGCACAACCACTAC 29161 | || | ||| || | ||| | |||| |||| |||||| || || | | ||| Sbjct 2262 GAAGAACTGGCCGACTGCCCGCCCGCATCCGGGTTCAGCCTGCCGCCGGGCACCGAATAC 2203 Query 29162 CTGATCGGCCACAACGTCGACTACGACTGGGACGTTGCCGGCAAGCCGAAGAACGTCCGC 29221 |||||||||||| |||| |||||||||||| | || |||| || | |||| Sbjct 2202 CTGATCGGCCACGACGTGGACTACGACTGGCAGGTGATCGGCGCACC---GCCCGTCAAG 2146 Query 29222 CGCATCTGCACCCTCGC 29238 ||||||||||| || || Sbjct 2145 CGCATCTGCACACTGGC 2129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 177233858593026