Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq649786 205 1e-47 seq533080 111 2e-19 seq360635 87.8 2e-12 seq418291 84.2 3e-11 >seq649786 Length=1608 Score = 205 bits (226), Expect = 1e-47 Identities = 559/853 (66%), Gaps = 24/853 (3%) Strand=Plus/Plus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 ||||| ||||| || || || ||||| || ||||||||||| || | ||| || || | Sbjct 41 TTTTGATATTCGCCCACCCGCTTCTCAAAGAAATTAGTTTTTCCCTGCAAGGAAATCATG 100 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCC---TAATTCTGAA 39442 ||||| || || || ||||| |||||||| ||||| ||| ||| || Sbjct 101 TCCATAAAGTCGAAAGGATTGACGGCATTATAAACTTTTTG---TCCGGTTAACTCCACC 157 Query 39443 ATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATG 39502 | ||| | ||||| ||||| ||||| ||| |||| | |||||| || || Sbjct 158 AGCAAACGGTCTGCCACAAACTCTATATATTGACACATCGAAGCGGCATTCATCCCGATT 217 Query 39503 AGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATT 39562 | | || || || | || || | |||||| ||||| || ||||||| ||| | || Sbjct 218 AAACTCACGGGAAGCGAATCGGTCACAAACTCCTTTTCAATTACTACGGCGTCTTTGATA 277 Query 39563 ATCGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAA-ACATTAAG--CAG 39619 || | || ||| | | || || | | |||||| | || || ||| Sbjct 278 ATTTCAATCACCCGCTCTTTTGGCAACGGCTGAATCACGTGTTTAGTATATAAATGACAG 337 Query 39620 GCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCA 39679 || || || ||||| | ||| || || | || ||||| || ||||| | | || Sbjct 338 GCAAAATCGCAATGCAAGCCTTCGTCGCGCGAGATCAATTCATTCGAAAAGCTCAAGCCC 397 Query 39680 GGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAA-GATCCAGAAAAGAAGAT 39738 ||||| || || || || || |||||||| |||| ||||||| || || || ||||| || Sbjct 398 GGCATCAGGCCGCGTTTCTTCAGCCAAAAGATGG-AGCAAAACGAACCCGAGAAGAAAAT 456 Query 39739 GCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGTATCCA 39798 ||||| || || ||||| |||| || | |||| | | | Sbjct 457 CCCTTCCACGGCGGCAAAAGCAATCAGACGCTCTTG--ANNNNNNNNNNNNNNNNAAC-- 512 Query 39799 CTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAG 39858 |||||||| |||||||| || || || ||| ||||| || || | || || Sbjct 513 -------GCCCAATCGGCTTTCTTTTTCACGCATTCCATCGTTTCAATGGCGTGAAGCAG 565 Query 39859 ATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGA 39918 | | ||| || | ||||| || || ||||| || | ||| ||| |||| || Sbjct 566 ACGGTCTTTCTCCTGCGCGTCTTTCACGTAGGTATCAATGAGCAGCGAATAGGTTTCGGA 625 Query 39919 ATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTAC 39978 ||||| ||||||| || || || || ||||| ||| || | ||||| ||| ||| || Sbjct 626 GTGGATATTTTCAACGGCAATTTGGAAGCCGTAGAAAAATTTAGCTTCCGTATATTGCAC 685 Query 39979 CTCTGA-ACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAA 40037 || || ||||||| || |||||| |||||| || || ||||| || || |||||||||| Sbjct 686 TTCCGACACAAAATGTT-CCGCCAGATTTTCGTTTACAATTCCGTCGCTGGCGGCAAAAA 744 Query 40038 ATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGA 40097 | ||||| || || | ||||||| | |||||| | | || | ||| || || | Sbjct 745 ACGCCAAAACGTGCGTGATAAAATGTCGCTCATCGTGGTTTAAGCCTTGCCAATCGTTCA 804 Query 40098 TATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACA 40157 ||||| || ||| | ||||||||| |||||||| || || || | ||||| | Sbjct 805 AATCTTGACTTAAATCAATTTCTTCAGCCGTCCAAAAGCTGGCTTCGGCTTGCTTGTAAA 864 Query 40158 TGTTCCATATATC 40170 ||||| || || Sbjct 865 ATTTCCAAATGTC 877 >seq533080 Length=1015 Score = 111 bits (122), Expect = 2e-19 Identities = 160/223 (72%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 69507 ATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACA 69566 ||| || |||| |||||||| |||||||| | | | || ||||| |||| ||||| Sbjct 550 ATAAAGTTGTTCAAATTCATCACCCCAAACTTTGTGAAGGCCTGGACACTCATGAGGACA 609 Query 69567 CATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAG 69626 ||||| || ||| || ||| || ||||| ||||| |||| ||| |||||||| || Sbjct 610 CATCAGTGTCCAGTCACCATTGCTCTCGACTCGCTTCATGAATAAATCTGGAATCCATAG 669 Query 69627 AGCTATA-AAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGA 69685 || ||| || || |||| | || | ||||| || ||||||||||| | ||| | Sbjct 670 TGC-ATAGAATAGGTCTCGTGCTCGCTGCTCTTCCTTGCCTGTATTTTTCCGACAATCCA 728 Query 69686 GAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGC 69728 |||| || | || || | |||||||||||| || || || || Sbjct 729 GAAAGTCAAAGATGTCGGCATGCCATGGTTCCAGGTAAATGGC 771 >seq360635 Length=7270 Score = 87.8 bits (96), Expect = 2e-12 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 68723 ATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCAT 68782 |||| || || ||||| | | ||| || || |||||||| || || || | | |||| Sbjct 612 ATTCTCCTGACAACACCCGTCTAGTATAGATGTTACTGGTGTAAGGCTCAAAACTTTCAC 553 Query 68783 TATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATT 68840 ||||||| ||| ||||||||||||||||||||||| || | ||||| | |||||| Sbjct 552 AGTTTCCCAAAATCTGAGCAGTTGATGCAGTTGGCATCGGAGACACCAGCAGACTATT 495 >seq418291 Length=2843 Score = 84.2 bits (92), Expect = 3e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 68441 TCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATAT 68500 |||| | |||||||||||| || | ||||||| ||| |||| || || || ||||| | Sbjct 1704 TCCAACAGTAGAAATGCATGCTGCTCAGTTTGGCATAGTTTGGTTCTGCAATGTGAATGT 1763 Query 68501 TCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCT 68560 | | || ||||| || || ||||| | || | ||| || ||||| || |||||| ||| Sbjct 1764 TGAGGGACTGACTCTGGTCAATGAACGGACCACGATCAGCAGCCATCTTGATAATAGTCT 1823 Query 68561 TTTGAGGAATTTCCCA 68576 | || | || ||||| Sbjct 1824 TCTGGGAGATCTCCCA 1839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 672659503748280