Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq649786 192 5e-44 seq307809 122 7e-23 >seq649786 Length=1608 Score = 192 bits (212), Expect = 5e-44 Identities = 574/881 (65%), Gaps = 29/881 (3%) Strand=Plus/Minus Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759 |||||| | ||||| ||| | || ||||| ||| || | ||||| |||| | || Sbjct 904 TTTGTCCTCTTTCCCATTGCCCACCACGACATTTGGAAATTTTACAAGCAAGCCGAAGCC 845 Query 43760 TCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCAC-ATTGGATTGCATT 43818 |||||||| || |||||| ||||||| | | |||| || | || ||||| | || Sbjct 844 AGCTTTTGGACGGCTGAAGAAATTGATTTAAGTCAAGATTT-GAACGATTGGCAAGGCTT 786 Query 43819 AAAACCACAA-GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACG 43877 ||| |||| | || ||||||||| | ||||||||||||||||| || ||||||| Sbjct 785 AAA-CCACGATGAGCGACATTTTATCACGCACGTTTTGGCGTTTTTTGCCGCCAGCGACG 727 Query 43878 GGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCAC 43937 | || || || |||||| ||| | |||| | ||||| |||| | ||||| Sbjct 726 GAATTGTAAACGAAAATCTGGCGGAACATTTTGTGTCGGAAGTGCAATATACGGAAGCTA 667 Query 43938 GATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTC 43997 || ||| || || || ||||||||| | |||||||| || || |||| || || | Sbjct 666 AATTTTTCTACGGCTTCCAAATTGCCGTTGAAAATATCCACTCCGAAACCTATTCGCTGC 607 Query 43998 TGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAAA 44057 | || ||||| ||| | ||||| | ||| ||||| | || || || | || || |||| Sbjct 606 TCATTGATACCTACGTGAAAGACGCGCAGGAGAAAGACCGTCTGCTTCACGCCATTGAAA 547 Query 44058 C-AGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGAT 44116 | | |||| | ||| | ||||| || ||||| | Sbjct 546 CGATGGAATGCG-TGAAAAAGAAAGCCGATTGGGCGTT-----------NNNNNNNNNNN 499 Query 44117 TCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCG 44176 | ||| || || | || ||||| | |||||||| |||||||| || || ||| Sbjct 498 NNNNNTCAAGAGCGTCTGATTGCTTTTGCCGCCGTGGAAGGGATTTTCTTCTCGGGTTCG 439 Query 44177 TTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAAT 44236 ||| |||| |||||| | |||||||| || ||||||| || |||| ||||| ||| Sbjct 438 TTTTGCTCCATCTTTTGGCTGAAGAAACGCGGCCTGATGCCGGGCTTGAGCTTTTCGAAT 379 Query 44237 GAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGATAT 44296 || || || || || |||||||| |||||||||| |||| ||| | || ||| Sbjct 378 GAATTGATCTCGCGCGACGAAGGCTTGCATTGCGATT----TTGCCTGTCATTTATATA- 324 Query 44297 CTAGGAGACG---ATAAGCCTT---CATGTAAGACAATTACAGATATTGTTGTAGAGGCA 44350 ||| | ||| | |||| | || || | | || ||| | ||| || Sbjct 323 CTA-AACACGTGATTCAGCCGTTGCCAAAAGAGCGGGTGATTGAAATTATCAAAGACGCC 265 Query 44351 GTAAAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAAT 44410 ||| || ||| | || ||| |||| | | || || | |||||| || |||||| Sbjct 264 GTAGTAATTGAAAAGGAGTTTGTGACCGATTCGCTTCCCGTGAGTTTAATCGGGATGAAT 205 Query 44411 GAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGT 44470 | || |||| |||||||| || | | ||||| ||||| || |||| | Sbjct 204 GCCGCTTCGATGTGTCAATATATAGAGTTTGTGGCAGACCGTTTGCTGGTGGAGTTAACC 145 Query 44471 TGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAA 44530 | | ||| |||| || || || || || |||||||| | ||||| ||| | Sbjct 144 GGACAAAAAGTTTATAATGCCGTCAATCCTTTCGACTTTATGGACATGATTTCCTTGCAG 85 Query 44531 GGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATCA 44571 || ||||| || || ||||| || || || || |||||||| Sbjct 84 GGAAAAACTAATTTCTTTGAGAAGCGGGTGGGCGAATATCA 44 >seq307809 Length=2175 Score = 122 bits (134), Expect = 7e-23 Identities = 459/715 (64%), Gaps = 4/715 (1%) Strand=Plus/Minus Query 40719 TTTTGGAAAGGCATTGCAGAAGAACTGTTATGGTTTATCAAAGGTTGTACTAATGCTAAG 40778 || ||||||||| ||| ||||| ||||| ||||| || ||| | || ||||| ||| Sbjct 1213 TTCTGGAAAGGCGTTGTGGAAGAGCTGTTGTGGTTCATTCGAGGATCAACAAATGCCAAG 1154 Query 40779 AAATTATCAGAAAGAGGAGTGCACATTTGGAATGCGCACAGTTCTAAAACATATTTGTCT 40838 | || | || | | || ||||| ||| | || | | || | ||| | Sbjct 1153 GAGTTGGCTGAGAAAAATGTCCACATCTGGGACGCCAATGGCTCACGAGCATTCCTCGAC 1094 Query 40839 AGCATAGGATTACAAGATAGGGATGAAGGTGATCTTGGTCCTGTTTATGGATTTCAGTCG 40898 | || || ||| | ||| | || ||||| || ||||| || || ||||| ||||||| | Sbjct 1093 AAAATTGGTTTAAACGATCGTGAGGAAGGCGACCTTGGACCGGTGTATGGTTTTCAGTGG 1034 Query 40899 CGACATTTTGGAGCAAAATATGACACTATGTACTCTGATTATACCAATAAAGGAATGGAT 40958 || |||| || || | || | ||| | ||||||||| | || ||||| Sbjct 1033 CGTCATTCAGGCGCTGATTACAAAGACATGCATCATGATTATACTGGGCAGGGTGTGGAT 974 Query 40959 CAATTACAGTGCGTTATAGATACGATTAAATCCGATCCCGATAGCCGACGTATAATATTG 41018 || || | || || || | ||||||| || || | |||| || || || Sbjct 973 CAGCTAAAAGATGTGATTGAGAAGATTAAAAGTTCACCAAATGACAGACGAATGATTATG 914 Query 41019 TGCGCGTGGAACCCAACGGACGTACATTTGATGGCATTGCCACCTTGTCATT-TGTTATG 41077 || |||||||| || | || | | ||||| ||||||| || || | | || Sbjct 913 TGTGCGTGGAATCCGAAAGATCTTCCCAAAATGGCGCTGCCACCATGCCACGCTCTGGTG 854 Query 41078 TCAGTTTTACGTTTGCAATGGTGAACTGTCATGTCAATTGTATCAAAGATCAGGTGACAT 41137 ||||| || ||| ||| || ||||| || || | ||||| || | || | || | Sbjct 853 -CAGTTCTATGTTGCCAACGGAGAACTCTCGTGCCTGTTGTACCAGCGCTCGGCAGATGT 795 Query 41138 GGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACA 41197 || || || || || |||||||| || || || ||| || | || ||||||||||| || Sbjct 794 TGGTCTCGGTGTTCCATTTAACATTGCCAGCTACGCTTTGTTGACATATATGATTGCTCA 735 Query 41198 CGTTACCAATTTAAAACCTGGTGAATTTGTTCACACGTTAGGAGATGGACATATTTACAT 41257 || || ||| ||| || || || | |||| | || ||| || ||||| | Sbjct 734 TGTGACTGGACTAAGACCAGGAGAGTTCATCCACAACATGGGTGATACTCACATTTATCT 675 Query 41258 TAATCACATAGAGCCGTTAACAGAACAACTGACACGAAAACCTAGACCATTTCCAACGC- 41316 |||||||| || ||||| | || || || | ||| || || || |||||||| ||| Sbjct 674 GAATCACATTGAACCGTTGAAGGAGCAGCTAAAACGCAAGCCAAGGCCATTTCC-TCGCT 616 Query 41317 TACTTATTAAACGCGCTGTTGAAAACATTGATGATTTTTGCATCGATGATTTTGTCGTTT 41376 | || ||| |||| || |||||||||| || | || || |||| | | Sbjct 615 TGAAGATCCTACGAAATGTTAAAGACATTGATGACTTCAACTATGAAGACTTTGAACTGT 556 Query 41377 GCGATTACAATCCGTACCCTAAAATCCACATGGACATGTCTGTATGATAATTGAT 41431 ||||||||||| | ||| || || |||| ||| | || | || ||| || Sbjct 555 TTGATTACAATCCACATCCTCCGATACAAATGGCAATGGCAGTCTAATGATTTAT 501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 389417259509635