Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq33146 114 4e-20 seq251356 113 1e-19 seq647165 100 8e-16 seq644427 100 8e-16 seq85824 100 8e-16 seq451568 93.3 1e-13 seq47075 93.3 1e-13 seq1602362 86.0 2e-11 >seq33146 Length=7457 Score = 114 bits (126), Expect = 4e-20 Identities = 409/636 (64%), Gaps = 5/636 (1%) Strand=Plus/Minus Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || || || || |||||||| |||||| |||| || || ||||| ||||| ||| Sbjct 5517 GTGGAGATCATCGCCAATGATCAGGGTAACCGAACGACCCCCAGCTACGTCGCATTCACC 5458 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || | |||||| |||| || ||| | || || || || | || || |||| || Sbjct 5457 GATTCAGAGCGTCTGATCGGAGATGCGGCCAAGAACCAGGTGGCCATGAACCCAACCAAC 5398 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCT 349438 || || || || || ||||| | || || ||||| || ||| | || || Sbjct 5397 ACCGTCTTCGACGCGAAGCGGTTGATCGGCAGAAGGTTCGACGACGCCGCCGTCCAGTCG 5338 Query 349439 GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAG 349498 || | || || | || || | || || | ||| || || || | || || Sbjct 5337 GACATGAAGCACTGGCCGTTCAACGTGGTG---AGCGACAATGGCAAGCCGAAGATCCAG 5281 Query 349499 GTTGAATATAAAGGTGAACAAAAACAATTTTTACCC-GAAGAAATTTCATCAATGGTTTT 349557 ||||| || || || ||| | || | || ||||| || || || ||||| ||||| | Sbjct 5280 GTTGATTACAAGGGGGAA-ACGAAGACCTTCTACCCAGAGGAGATCTCATCGATGGTGCT 5222 Query 349558 AGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTAT 349617 || || ||||||||||| || || || || | || | || || || | || || || Sbjct 5221 CGTCAAGATGAAGGAAATCGCCGAGGCGTACCTGGGCAAGACCGTGACGAACGCCGTCAT 5162 Query 349618 TACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCAT 349677 || || || || || || || || | |||||| || || || ||||| || ||| Sbjct 5161 CACAGTTCCGGCTTACTTCAACGACTCGCAGCGTCAGGCGACGAAGGATGCAGGAGCCAT 5102 Query 349678 TGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGG 349737 |||| | || || || | || || || || || || || ||||| || ||||| || Sbjct 5101 CTCGGGCATGAACGTGCTGCGTATCATCAACGAGCCAACGGCCGCAGCCATCGCATACGG 5042 Query 349738 GCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTAC 349797 || || || | | | ||| | || | || || |||||| | || ||||| || Sbjct 5041 TCTAGACAAGAAGGTCGGGGGAGAGAGGAACGTGCTGATCTTTGATCTTGGCGGTGGCAC 4982 Query 349798 TTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGG 349857 || ||||| || | || || | || || || || ||||| || || | || | || Sbjct 4981 CTTCGATGTGTCGATCCTGACCATCGAGGACGGCATCTTTGAGGTGAAGTCGACGTCGGG 4922 Query 349858 TGATACACATCTTGGTGGAGAAGATTTTGATAATCG 349893 || || || | || ||||| || || || || || Sbjct 4921 CGACACTCACTTGGGAGGAGAGGACTTCGACAACCG 4886 >seq251356 Length=4137 Score = 113 bits (124), Expect = 1e-19 Identities = 249/371 (67%), Gaps = 8/371 (2%) Strand=Plus/Plus Query 350272 AATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGG 350331 |||||| ||||| || || ||||||||||| |||||||||||||| | | ||| Sbjct 849 AATTAACCCAGACGAGGCAGTTGCATATGGAGCTGCTGTTCAGGCCGGAGTCCT---TGG 905 Query 350332 AAAT-AAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTG 350390 | ||||| | | | ||| || | || || ||||| | ||| || | | | Sbjct 906 AGGGGAAGAGGAC----ACGGGTGACCTTGTGCTGCTGGATGTTAATCCTCTGACAATGG 961 Query 350391 GATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTA 350450 | | ||||| ||| | || |||||| || ||| | | |||| | | || | Sbjct 962 GCATTGAAACAGTTGGAGGCGTCATGACTAAGCTGATTGGTCGTAATACAGTTATTCCCA 1021 Query 350451 CAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAG 350510 |||| ||||| || | ||||||||| ||| || ||||||||| | |||||||| || | Sbjct 1022 CAAAGAAGTCGCAGATCTTTTCTACAGCTGCCGACAATCAGCCAACTGTAACAATCCAGG 1081 Query 350511 TATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAA 350570 | ||||||||||| ||| | || ||||| || | ||||| | ||| ||| | Sbjct 1082 TGTTTGAAGGTGAGCGTCCAATGACCAAAGACAACCACCTTCTTGGTAAGTTTGACCTGA 1141 Query 350571 GTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATT 350630 | ||| ||| | ||| |||||||||| || ||||| || |||| || |||||| Sbjct 1142 CCGGAATCCCAGCTGCACCTCGAGGAGTTCCACAAATTGAGGTTACTTTTGAAATTGATG 1201 Query 350631 CAAATGGTATT 350641 ||||| ||| Sbjct 1202 TGAATGGAATT 1212 >seq647165 Length=2149 Score = 100 bits (110), Expect = 8e-16 Identities = 131/179 (73%), Gaps = 3/179 (2%) Strand=Plus/Minus Query 349233 GTGTTGCTGTTTGGCAAAATGATCGTGTAGAAATAATTGCAAATGATCAAGGTAACAGAA 349292 |||||| ||| | |||||| |||||| || |||||||| ||||||||||| || | | Sbjct 423 GTGTTGGTGTATACAAAAATGGTCGTGTCGAGATAATTGCCAATGATCAAGGCAATCGCA 364 Query 349293 CAACGCCATCATACGTTGCATTTAC-CGAAACTGAG--CGTATGATTGGTGATTCTGCAA 349349 || || ||||||||||| || || | | | ||| ||| ||||||| ||| |||| | Sbjct 363 TTACACCGTCATACGTTGCCTTCACACCAGAGGGAGAACGTCTGATTGGAGATGCTGCCA 304 Query 349350 AAAATCAAGCTGCTGCTAATCCAAAAAATACGGTTTTTGATGCTAAGCGACTTATTGGT 349408 | || || | | | ||||| |||||||||||||||| ||||| | |||||| Sbjct 303 AGAACCAGCTTACCTCGAATCCGGAAAATACGGTTTTTGACATAAAGCGTTTGATTGGT 245 >seq644427 Length=940 Score = 100 bits (110), Expect = 8e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 205179 CATAAACAGATCTGAAATCCAAAGAGCATAAAAAAGGTCACGAGCGCGAAGTTCTTCGTC 205238 |||||| || || | ||||||||| ||||||||||| || || || || | |||||| | Sbjct 4 CATAAATAGGTCGGGAATCCAAAGCGCATAAAAAAGATCGCGTGCCCGCATTTCTTCCTT 63 Query 205239 TCCATGATTTTTCTTTAAATCTAAAAATTCTTCAATATCCGGATGATGTGGTTCAATATA 205298 || |||||||||||||| || ||||| || |||||| | || ||||| | ||| Sbjct 64 GCCGTGATTTTTCTTTAACTCCAAAAAATCAAAAATATCGGCGTGCCAGGGTTCTAGATA 123 Query 205299 CATAGCAAAACTTCCAGCTCTTTTTCCACCACC 205331 || ||||||||||| | |||||| || || Sbjct 124 AATGGCAAAACTTCCTTTGCGTTTTCCGCCGCC 156 >seq85824 Length=5709 Score = 100 bits (110), Expect = 8e-16 Identities = 118/159 (74%), Gaps = 3/159 (2%) Strand=Plus/Plus Query 349715 ACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTT 349774 ||||||||||||||||| ||||| || ||||| || || || || ||||| || Sbjct 2133 ACTGCTGCAGCAATTGCCTATGGACTAGATAA---GAAAGAAGGTGAGAAGAATATCCTG 2189 Query 349775 ATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATT 349834 | |||||| | || ||||||||||||||||| | || || || |||| | ||| | Sbjct 2190 GTGTTTGATCTTGGCGGTGGTACTTTTGATGTTACTCTTCTGACCATTGACAATGGAGTC 2249 Query 349835 TTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGT 349873 ||||||||| |||| ||| ||||||||||||||| Sbjct 2250 TTTGAAGTTTTGTCAACCAATGGAGATACACATCTTGGT 2288 Score = 89.7 bits (98), Expect = 2e-12 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 || || || || ||| | ||||| | | ||||||||||| | ||| || || || | Sbjct 1128 CCAGAGGAGATCTCAGCCATGGTGCTCATCAAAATGAAGGAGACTGCAGAGGCTTACCTT 1187 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 || ||| || || |||||||| | ||||| ||||| || || || ||||| ||| | Sbjct 1188 GGCAAAAAGGTGACACATGCTGTTGTAACTGTTCCAGCATACTTCAACGATGCTCAGAGA 1247 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 ||||| |||||||||||| |||||| || |||| || | | || |||||||| Sbjct 1248 CAGGCAACTAAAGATGCTGGCGTCATTGCAGGCCTAAACGTCATGCGCATCATTAATGAG 1307 Query 349712 CC 349713 || Sbjct 1308 CC 1309 >seq451568 Length=2825 Score = 93.3 bits (102), Expect = 1e-13 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 140622 TCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGAT 140681 || |||||||| ||||| || || || |||||||| || ||||| ||||| | || | Sbjct 2665 TCTGGAGGAATGCCTTCCTTGTCTTGGATTTTAGCCTTCACATTCTCAATGGTGTCGCTT 2606 Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| ||||| |||| |||||| || || || || || || ||||||||||| Sbjct 2605 GGCTCAACCTCAAGGGTAATTGTCTTGCCCGTAAGCGTCTTGACGAAAATCTGCAT 2550 >seq47075 Length=4692 Score = 93.3 bits (102), Expect = 1e-13 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 140548 CTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGA 140607 |||| ||||| ||||||||| || |||| |||||||| || || ||||| ||||||| Sbjct 2978 CTTTCTGAATGTTATAATCACTCAAGGTTCTTCCATCTTCGAGCTGCTTTCCCGCAAAGA 2919 Query 140608 TTAGACGTTGCTGATCAGGAGGAATTCCT 140636 | |||||||||||||||||||| || ||| Sbjct 2918 TCAGACGTTGCTGATCAGGAGGGATGCCT 2890 >seq1602362 Length=301 Score = 86.0 bits (94), Expect = 2e-11 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 378250 GTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATGGAAGAATAATTCA 378309 ||||| || ||||||||||| | || ||||||| ||||| || ||||| | || ||| Sbjct 11 GTTTTGACGGCAGTATCAATAAGTCCCTCACGACCTCCCATGGCGTGGAAATAGAACTCA 70 Query 378310 GTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCCTGGCGAATCA 378369 | ||||| || || | | | | || |||| | ||||||||| | |||| || | Sbjct 71 ATTGGAGTGAGACCGGCCAGATAGGAGTTCTCGACAAATCCTCTGGATTCTGGACCATAA 130 Query 378370 TCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCATATGGAATTCGTTTTCCA 378429 |||| || | | || || | ||||||| ||| || ||||||| || ||||| Sbjct 131 TCATCCTTGATGAAGTGCGGAAGAGTACGATGACGAAAGCCGAATGGAATACGCTTTCCT 190 Query 378430 TCAACATTCTGTTGACC 378446 ||||| ||||| || || Sbjct 191 TCAACGTTCTGCTGTCC 207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1483036015895181