Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq644427 107 2e-18 >seq644427 Length=940 Score = 107 bits (118), Expect = 2e-18 Identities = 269/406 (66%), Gaps = 2/406 (0%) Strand=Plus/Plus Query 79380 CTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTC 79439 || ||| || ||||| || ||||| || || || || ||||| ||||| || || Sbjct 1 CTTCATAAATAGGTCGGGAATCCAAAGCGCATAAAAAAGATCGCGTGCCCGCATTTCTTC 60 Query 79440 GTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAG 79499 | ||| || || | ||| | ||| || | || ||||||||||| || || || Sbjct 61 CTTGCCGTGATTTTTCTTTAACTCCAAAAAATCAAAAATATCGGCGTGCCAGGGTTCTAG 120 Query 79500 ATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTT 79559 ||| ||||| || || ||||| || |||||||| |||| || || || ||||| | Sbjct 121 ATAAATGGCAAAACTTCCTTTGCGTTTTCCGCCGCCTTGGTCTACATAGCGTGCCGTCAT 180 Query 79560 GTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCG 79619 || ||| ||||||||||| | |||||||| | | |||| ||| || || || Sbjct 181 GTCAAAATTGCGGAGCATGGGGATGATGCCGTTAGAGGTGCCGCCCGTTCCCTTTATGTA 240 Query 79620 TGTACCGCTCGCCCGAATGTTCGAGCA-GTGGATTCCGATGCCCCCGGACCACTTGGAGA 79678 | || | || || | ||| | | | | | |||| ||| || | | | | ||| | Sbjct 241 GGAGCCTTTGGCGCGCACGTT-GTGAATGCTCAAGCCGACGCCGCCCGCCGATTGGGAAA 299 Query 79679 TGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGA 79738 | | ||| | || | || || || ||||| ||||| |||||||||||| | || Sbjct 300 TTTTGGCGGTTTGTTTTAAGGTGTCATAAATGCCGTCGATGCTGTCGTCCTTCATCGTGA 359 Query 79739 CCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAA 79784 ||||||||||| || | || || ||| ||| || || ||||| Sbjct 360 GGAGGAAGCAGCTTGAAAGTTGCGGCTTGGGCGTGCCCGCATTGAA 405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537146153552880