Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq644427 104 3e-17 seq649786 84.2 2e-11 >seq644427 Length=940 Score = 104 bits (114), Expect = 3e-17 Identities = 267/404 (66%), Gaps = 2/404 (0%) Strand=Plus/Minus Query 53296 GTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGA 53355 |||||| || || ||| | || || | || ||||||||||| | |||||||||| Sbjct 406 GTTCAATGCGGGCACGCCCAAGCCGCAACTTTCAAGCTGCTTCCTCCTCACGATGAAGGA 347 Query 53356 TGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTC 53415 ||| ||||||||||| || || || | || | ||| | || ||| | | | | Sbjct 346 CGACAGCATCGACGGCATTTATGACACCTTAAAACAAACCGCCAAAATTTCCCAATCGGC 287 Query 53416 GGGTGGTATCGGTATCCAC-TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGA 53474 ||| || |||| | | | | | ||||| || || || ||| | || ||||| | Sbjct 286 GGGCGGCGTCGGCTTGAGCATTCAC-AACGTGCGCGCCAAAGGCTCCTACATAAAGGGAA 228 Query 53475 CGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGT 53534 || |||| | | | || ||| | || ||||||||| || ||| ||||| || | Sbjct 227 CGGGCGGCACCTCTAACGGCATCATCCCCATGCTCCGCAATTTTGACATGACGGCACGCT 168 Query 53535 ACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGC 53594 | || |||| || || || || ||||| || || ||||| || || || || |||| Sbjct 167 ATGTAGACCAAGGCGGCGGAAAACGCAAAGGAAGTTTTGCCATTTATCTAGAACCCTGGC 108 Query 53595 ACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCT 53654 ||||||| ||| | || ||| | ||| | ||||| || | ||||| ||||| Sbjct 107 ACGCCGATATTTTTGATTTTTTGGAGTTAAAGAAAAATCACGGCAAGGAAGAAATGCGGG 48 Query 53655 GCCGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATG 53698 || || || ||| || || |||||||| ||||| || ||| Sbjct 47 CACGCGATCTTTTTTATGCGCTTTGGATTCCCGACCTATTTATG 4 >seq649786 Length=1608 Score = 84.2 bits (92), Expect = 2e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 74750 GGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCC 74809 |||||| || |||| ||||||| || | ||||||||||||||||| | ||| Sbjct 337 GGCAAAATCGCAATGCAAGCCTTCGTCGCGCGAGATCAATTCATTCGAAAAGCTCAAGCC 396 Query 74810 AGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGAT 74869 ||||| || || || ||||||| ||||||||||| || || ||||| |||||| || Sbjct 397 CGGCATCAGGCCGCGTTTCTTCAGCCAAAAGATGGAGCAAAACGAACCCGAGAAGAAAAT 456 Query 74870 GCCTTCGAC 74878 ||||| || Sbjct 457 CCCTTCCAC 465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 535864503414600