Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq451568 132 5e-26 seq625167 95.1 1e-14 seq649786 91.5 2e-13 >seq451568 Length=2825 Score = 132 bits (146), Expect = 5e-26 Identities = 102/121 (84%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| || || |||||||||||||| |||||||| ||||| |||||||||||| || Sbjct 2547 ATCATGCAGATTTTCGTCAAGACGCTTACGGGCAAGACAATTACCCTTGAGGTTGAGCCA 2606 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | || | ||||| ||| ||||||||||||| || |||||||| || |||||||||||| Sbjct 2607 AGCGACACCATTGAGAATGTGAAGGCTAAAATCCAAGACAAGGAAGGCATTCCTCCAGAC 2666 Query 27523 C 27523 | Sbjct 2667 C 2667 >seq625167 Length=369 Score = 95.1 bits (104), Expect = 1e-14 Identities = 98/127 (77%), Gaps = 1/127 (1%) Strand=Plus/Plus Query 27404 TAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAG 27463 |||| || || ||||| ||||| || || || || || || || |||| |||||| || Sbjct 155 TAAT-CAGATTTTTGTGAAGACACTGACTGGTAAAACGATCACCCTTGGGGTTGAACCAA 213 Query 27464 GTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| | ||||| || ||||||| || || | ||||||| |||||||||||||||| Sbjct 214 GTGACACCATTGAGAACGTGAAGGCAAAGATCCTATACAAGGAAGGAATTCCTCCAGACC 273 Query 27524 AGCAGCG 27530 ||||||| Sbjct 274 AGCAGCG 280 >seq649786 Length=1608 Score = 91.5 bits (100), Expect = 2e-13 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 64715 AGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTA 64774 ||||||| ||||||||| |||||||| |||||||| || || || || || || | Sbjct 488 AGCGTCTGATTGCTTTTGCCGCCGTGGAAGGGATTTTCTTCTCGGGTTCGTTTTGCTCCA 429 Query 64775 TTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCT 64834 | || ||||| || || || ||||||||||| || || |||||||| || |||||| Sbjct 428 TCTTTTGGCTGAAGAAACGCGGCCTGATGCCGGGCTTGAGCTTTTCGAATGAATTGATCT 369 Query 64835 CTCGGGACGAGGG 64847 | || ||||| || Sbjct 368 CGCGCGACGAAGG 356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 558479831160240