Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq307809 253 2e-62 >seq307809 Length=2175 Score = 253 bits (280), Expect = 2e-62 Identities = 428/620 (69%), Gaps = 0/620 (0%) Strand=Plus/Plus Query 29840 GGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTAG 29899 ||||| || || |||| | | ||||| ||||| |||||| | || || ||| || Sbjct 621 GGAAATGGCCTTGGCTTGCGTTTTAGCTGCTCCTTCAACGGTTCAATGTGATTCAGATAA 680 Query 29900 ACGTGAGCGTCTCCCAGGTTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCC 29959 | ||||| || |||| |||||||| |||||||| ||| ||| || || || ||||| Sbjct 681 ATGTGAGTATCACCCATGTTGTGGATGAACTCTCCTGGTCTTAGTCCAGTCACATGAGCA 740 Query 29960 ATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCC 30019 ||||| || || | | || ||||||||| |||||||| || || ||||| || | || Sbjct 741 ATCATATATGTCAACAAAGCGTAGCTGGCAATGTTAAATGGAACACCGAGACCAACATCT 800 Query 30020 CCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACATG 30079 |||| | |||||| | | | |||||||| ||||||| | || || ||||| || Sbjct 801 GCCGAGCGCTGGTACAACAGGCACGAGAGTTCTCCGTTGGCAACATAGAACTGCACCAGA 860 Query 30080 GCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATG 30139 |||||||| || || || ||||| | | ||||| || ||||| || |||| || Sbjct 861 GCGTGGCATGGTGGCAGCGCCATTTTGGGAAGATCTTTCGGATTCCACGCACACATAATC 920 Query 30140 ATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACC 30199 || || ||||| | ||| | | || || | | | || ||||||||||| Sbjct 921 ATTCGTCTGTCATTTGGTGAACTTTTAATCTTCTCAATCACATCTTTTAGCTGATCCACA 980 Query 30200 CCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGG 30259 ||| ||| | || || |||||| |||| || || || |||| | |||||| Sbjct 981 CCCTGCCCAGTATAATCATGATGCATGTCTTTGTAATCAGCGCCTGAATGACGCCACTGA 1040 Query 30260 AACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAA 30319 || || ||||||||||| ||||| || || || | | | || || | ||||| | Sbjct 1041 AAACCATACACCGGTCCAAGGTCGCCTTCCTCACGATCGTTTAAACCAATTTTGTCGAGG 1100 Query 30320 AAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAG 30379 || ||| || || |||||||||||||| | || ||||||| | ||| |||| Sbjct 1101 AATGCTCGTGAGCCATTGGCGTCCCAGATGTGGACATTTTTCTCAGCCAACTCCTTGGCA 1160 Query 30380 TTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTC 30439 ||||| || |||| | |||||||| |||||| ||||| ||| | ||||| ||||| | | Sbjct 1161 TTTGTTGATCCTCGAATGAACCACAACAGCTCTTCCACAACGCCTTTCCAGAAGACGCGC 1220 Query 30440 TTGGTCGTGAGGAGGGGAAA 30459 || || || || || ||||| Sbjct 1221 TTTGTTGTCAGAAGAGGAAA 1240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398092574972484