Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_028657.1 Length=60919 Score E Sequences producing significant alignments: (Bits) Value seq654591 152 2e-32 seq1098788 118 4e-22 seq515650 98.7 4e-16 >seq654591 Length=8035 Score = 152 bits (168), Expect = 2e-32 Identities = 199/272 (73%), Gaps = 10/272 (4%) Strand=Plus/Minus Query 7267 AGCAGCATGAGAGGTGTTAACAAAGTCATTCTGGTTGGTAACGTCGGTGGTGACCCGGAA 7326 ||||||||| | || ||||||||||| | || || ||| | || | ||||| ||| Sbjct 6280 AGCAGCATGGCATCCGTGAACAAAGTCATCATCGTCGGCAACCTGGGCCGCGACCCTGAA 6221 Query 7327 ACCCGCTACATGCCCAA----CGGC-AATGCGGTGACCAACATCACCCTCGCCACCAGCG 7381 | || ||| | ||| | |||| || || |||| ||||| ||||||||| || Sbjct 6220 ATGCG-TACCTTCCCCAGTGGCGGCCAAATCG----CCAATGTCACCGTCGCCACCACCG 6166 Query 7382 AGAGCTGGAAGGACAAGCAGACCGGCCAGCAACAGGAACGCGCCGAGTTCCACCGCGTGG 7441 | | ||||| |||||||||||||| | ||||| | |||||| |||||||||| Sbjct 6165 ACAAGTGGAAAGACAAGCAGACCGGTGAAATGAAGGAAGCCACCGAGTGGCACCGCGTGG 6106 Query 7442 TGTTCTTCGGTCGCCTGGCGGAGATCGCCGGCGAGTACCTGCGCAAGGGTTCCCAGGTCT 7501 | || || || |||||||| |||||| || ||||||||||||| || || ||||| | Sbjct 6105 TCTTTCGCGACCGTCTGGCGGAAATCGCCAGCCAGTACCTGCGCAAAGGCTCGCAGGTGT 6046 Query 7502 ACGTCGAAGGCAGCCTGCGCACCCGCAAGTGG 7533 | || |||||||| ||||||||||||| ||| Sbjct 6045 ATGTGGAAGGCAGTTTGCGCACCCGCAAATGG 6014 >seq1098788 Length=117 Score = 118 bits (130), Expect = 4e-22 Identities = 94/113 (83%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 18428 GACGAGAAGGGTACGCAGATTGTGCGTACCCCTGGCGGCGATCAGGAAATGCTGGTCATC 18487 ||||| |||||||||| ||||||||||||| | |||| |||||| | ||||| ||||| Sbjct 117 GACGAACAGGGTACGCACATTGTGCGTACCCTTCGCGGTGATCAGAACATGCTCATCATC 58 Query 18488 AACGAGTCTGGGCTGTACTCGGCGATCCTGCGCAGCCGCAAGGCTGAGGCCAA 18540 |||||||| || || ||||| || |||||||||||||| || | |||||||| Sbjct 57 AACGAGTCCGGCCTCTACTCCGCCATCCTGCGCAGCCGGAAACCCGAGGCCAA 5 >seq515650 Length=11028 Score = 98.7 bits (108), Expect = 4e-16 Identities = 77/92 (84%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 53678 TCATCGCGGTACACGAACATGACGATGTCGGCGTCTTGCTCAATGGCGCCGGACTCGCGC 53737 || |||||||| | |||||||| ||||||||| |||||||| |||||||||||||||||| Sbjct 8998 TCGTCGCGGTAGATGAACATGATGATGTCGGCATCTTGCTCGATGGCGCCGGACTCGCGC 8939 Query 53738 AGGTCGCTGAGGACCGGACGCTTGTCGGGGCG 53769 |||||| | | ||| || ||||||| ||| Sbjct 8938 AGGTCGGACATCAGCGGGCGTTTGTCGGTGCG 8907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190979920795094