Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_028785.1 Length=72790 Score E Sequences producing significant alignments: (Bits) Value seq652898 300 7e-77 seq636339 105 3e-18 >seq652898 Length=17576 Score = 300 bits (332), Expect = 7e-77 Identities = 523/755 (69%), Gaps = 7/755 (1%) Strand=Plus/Plus Query 64065 CCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGG 64124 |||||||||| | | |||||| ||| |||||| | ||||| || | ||||||| Sbjct 16678 CCACCGGCTCGCTGGGCCTGGACATCGCGCTGGGCGTGGGGGGCCTGCCCCGTGGCCGGG 16737 Query 64125 TGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGG 64184 |||| |||||||| ||||| ||||| || || ||| | || ||| || || | | | | Sbjct 16738 TGGTTGAAATCTATGGCCCGGAATCCTCGGGCAAGACCACGCTGGCGCTGCAGGTGATCG 16797 Query 64185 CCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACC 64244 || | ||| ||| || |||| | ||||| | |||| || ||||| | |||||| Sbjct 16798 CCGAGATGCAAAAGCAGGGCGGCACCTGCGCCTTCGTCGATGCGGAGCATGCGCTGGACG 16857 Query 64245 CTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACA 64304 | ||||| | ||||| ||| | || | |||| || | ||||| |||| Sbjct 16858 TGCAATACGCGCAAAAACTCGGCGTGCAACTGTCCGACCTGCTGATCAGCCAGCCCGACA 16917 Query 64305 CTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCG 64364 | ||||| || || ||||||||||| ||| ||| || || |||| | | | | Sbjct 16918 CCGGCGAACAAGCGCTGGAGATCGTCGACAGCCTGGTGCGCTCCGGCGCGGTCGACCTGA 16977 Query 64365 TCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGG 64424 |||| || ||||| ||||| |||||| ||| ||||| ||||||||||||| || | Sbjct 16978 TCGTGGTGGACTCGGTGGCCGCCCTGACGCCCAAGGCCGAAATCGAAGGCGACATGGGCG 17037 Query 64425 ACAGTCACGTCGG-CCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGC 64483 || | | | ||| |||||| ||||| || ||| ||||| ||||||||||||||| Sbjct 17038 AC-GCCCTGCCGGGCCTGCAAGCGCGGCTGATGAGCCAGGCATTGCGCAAGCTCACCGCG 17096 Query 64484 ACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGC 64543 || ||| | |||||| || ||| |||||||| | ||| |||||||||| Sbjct 17097 ACGATCAAGAAGACCAACTGCATGGTCGTCTTCATCAACCAGATCCGCATGAAGATCGGC 17156 Query 64544 AACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCC 64603 || | | |||| ||| |||||||| |||||||| || | | |||||||||| Sbjct 17157 GTGATGTTCGGCAGCCC---CGAAACCACCACCGGCGGCAATGCGCTCAAGTTCTACGCC 17213 Query 64604 TCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGC 64663 || || ||| |||| |||| |||| || |||| ||| | |||||||| || | ||| Sbjct 17214 TCGGTGCGCCTGGACATCCGCCGCACCGGCACCATCAAGAAGGGCGATGAAGCCATTGGC 17273 Query 64664 AACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAG 64723 ||| ||| ||| ||||| ||||||||||| | ||||||| | | ||||||| Sbjct 17274 AACGAAACCAAGGTCAAGGTGGTCAAGAACAAAGTCAGCCCGCCGTTCAAGACCGCCGAG 17333 Query 64724 TTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGTG 64783 ||| | || ||| || || |||||| || |||| |||| || ||||| ||| |||| Sbjct 17334 TTCGACATCCTGTTTGGCGAAGGCATCAGCCGCGAGGGCGAAATCATCGACATGGGCGTG 17393 Query 64784 -TCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGT 64817 ||| | | ||| | |||||||||||||||| Sbjct 17394 AACGCCAAG-ATCGTGGAAAAGTCGGGCGCCTGGT 17427 >seq636339 Length=1141 Score = 105 bits (116), Expect = 3e-18 Identities = 91/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 64371 TTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTC 64430 ||||||| ||||| ||||||||||| || ||| | |||||||| || ||||| || Sbjct 515 TTGACTCGGTGGCCGCCCTGGTGCCCAAGGCGGAGTTGGAAGGCGAGATGGGGGAAAGCA 456 Query 64431 ACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGC 64483 | | || |||| |||||||||||||||||||| ||||||||||||||||| Sbjct 455 AAATGGGGTTGCAGGCGCGCCTCATGTCGCAGGCGTTGCGCAAGCTCACCGGC 403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 228094642297697