Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_028809.1 Length=58637 Score E Sequences producing significant alignments: (Bits) Value seq642390 152 2e-32 seq1606471 123 9e-24 >seq642390 Length=3645 Score = 152 bits (168), Expect = 2e-32 Identities = 151/193 (78%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 4903 CGAGCTGTGGGACGCGG-TCATGCGCTCCACCTGGGACTGGGCCGAGCCGGGCGTCCTGT 4961 || ||||||||| ||| ||||||| || ||| |||| |||||||||||| |||||| Sbjct 1283 CGCGCTGTGGGA-GCGCATCATGCGTTCGGCCTACGACTATGCCGAGCCGGGCATCCTGT 1341 Query 4962 TCATCGACCGCATCAACGAGATGAACAACCTCCACTACTGCGAGACCATCGCGGCGACCA 5021 || | | ||||||||||||| |||||||| || ||||||||||||||| |||| |||| Sbjct 1342 TCCTGGGCCGCATCAACGAGGACAACAACCTGCATTACTGCGAGACCATCACGGCCACCA 1401 Query 5022 ACCCGTGCGGCGAGCAGCCGCTGCCACCGTTCGGCGCCTGCCTGCTCGGCTCCTTCAACC 5081 |||| |||||||||||||| ||||| | | ||| |||| || ||| || ||| || Sbjct 1402 ACCCCTGCGGCGAGCAGCCCCTGCCTGCCTATGGCTGCTGCGACCTGGGCCCCGTCATCC 1461 Query 5082 TGGTGCGCTACGT 5094 || |||| ||| Sbjct 1462 TGCCCCGCTTCGT 1474 >seq1606471 Length=311 Score = 123 bits (136), Expect = 9e-24 Identities = 134/178 (75%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 4906 GCTGTGGGACGCGGTCATGCGCTCCACCTGGGACTGGGCCGAGCCGGGCGTCCTGTTCAT 4965 ||||||||| | | ||||| |||||| | || | |||||||| ||| || | |||| Sbjct 267 GCTGTGGGATGTGATCATGTCCTCCACGTATGATTTTGCCGAGCCCGGCTTCATCCTCAT 208 Query 4966 CGACCGCATCAACGAGATGAACAACCTCCACTACTGCGAGACCATCGCGGCGACCAACCC 5025 || |||| |||||||||||| | | |||||| |||||| || |||||||| Sbjct 207 TGATAAGGTCAATGAGATGAACAACAACTGGTTCTGCGAAACCATCCGCGCCACCAACCC 148 Query 5026 GTGCGGCGAGCAGCCGCTGCCACCGTTCGGCGCCTGCCTGCTCGGCTCCTTCAACCTG 5083 || ||||||||||||||||| || | |||||||||||||| || ||| ||||| || Sbjct 147 TTGTGGCGAGCAGCCGCTGCCGCCTTATGGCGCCTGCCTGCTGGGTTCCATCAACTTG 90 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 183821428338426