Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_028818.1 Length=57168 Score E Sequences producing significant alignments: (Bits) Value seq1570345 203 1e-47 seq1291165 145 3e-30 seq1211356 109 2e-19 seq694675 109 2e-19 seq693470 107 7e-19 seq737403 104 8e-18 seq1159256 102 3e-17 seq682472 96.9 1e-15 seq705999 82.4 3e-11 seq686436 82.4 3e-11 >seq1570345 Length=246 Score = 203 bits (224), Expect = 1e-47 Identities = 180/225 (80%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 33911 TCAGGATGTACGGGGCGTTCTGCCCCTTCTTCGCCTCACCCTTCGCGACGACGCCGAGCA 33970 |||||||||| ||| |||||| |||||||||||||| || ||||| ||||||||||| Sbjct 225 TCAGGATGTAGGGGCGGTTCTGACCCTTCTTCGCCTCGCCGAGCGCGATGACGCCGAGCA 166 Query 33971 GCTTCCGGCCGCCGGGAATCTTCCGCTTCAGCTGGCCGATCAGGCTGCCCTGGAAGATCA 34030 |||| |||| ||| | ||| ||||| ||||| | |||||| ||||||||||||| Sbjct 165 GCTTGCGGCTGCCCGCGATCCGGCGCTTGAGCTGACTGATCAGCGACCCCTGGAAGATCA 106 Query 34031 TCTGGTCGTCGTACTCGGCCGGACCGCCCTCGGCGGTCAGCACGACCAGGTTGGCCATGA 34090 || |||||||||||| |||| ||||| ||||| ||||| || ||||||| || | | Sbjct 105 TCACGTCGTCGTACTCATCCGGGCCGCCGTCGGCCGTCAGAACCACCAGGTCGGTGGTCA 46 Query 34091 CCGCGTCCTTGTCGCCGAAGTCGGTCTTGACCTCTTCCACGTACT 34135 ||||||||||| ||||||| |||| || |||||||||||||| Sbjct 45 CCGCGTCCTTGGTGCCGAAGGACGTCTCGAACTCTTCCACGTACT 1 >seq1291165 Length=133 Score = 145 bits (160), Expect = 3e-30 Identities = 107/125 (86%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 45675 GGGAAGACTGACTGCCTGGTCCTGGACATCGCGGGTGCGTCGCTGAAACACAACCTGGCC 45734 || ||||| ||||||||||| |||||||||||||| || |||||||| |||| ||| ||| Sbjct 1 GGCAAGACCGACTGCCTGGTTCTGGACATCGCGGGCGCCTCGCTGAACCACAGCCTCGCC 60 Query 45735 GGCGTGAACGACCTGGAATCGGACTGCGCCGGACGGTGTGACTGCAACTGTCTGTCCTGC 45794 || || |||||||||||||||||||||| || |||||||||||| |||| || ||||| Sbjct 61 GGGGTCAACGACCTGGAATCGGACTGCGAGGGGCGGTGTGACTGCGACTGCCTCACCTGC 120 Query 45795 GGGTG 45799 || || Sbjct 121 GGCTG 125 >seq1211356 Length=125 Score = 109 bits (120), Expect = 2e-19 Identities = 96/120 (80%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 46103 GGCGGGCATCCGCTTCCTGCCGGTCGGACAGGACGTCAACCTGTTCCTGCTGCCGGACCC 46162 ||| ||||||||||||||| | ||||| |||||||| ||||||||||||||||||||||| Sbjct 124 GGCCGGCATCCGCTTCCTGACCGTCGGCCAGGACGTGAACCTGTTCCTGCTGCCGGACCC 65 Query 46163 GAACGAGCCCGGCCAGTTCTTCCAGGGGAAGGTTGAAGGGGCCACCGCTAAGGCCCCTGT 46222 | | | || |||| ||||||||| || || || || | |||| ||||| ||||| Sbjct 64 GGCCAACCCGGGCCGGTTCTTCCACGGCCGCGTCGAGGGTTCGTCCGCGAAGGCGCCTGT 5 >seq694675 Length=100 Score = 109 bits (120), Expect = 2e-19 Identities = 83/98 (85%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 38258 TACGGGTGGACCCGCTCGCCCACCAGGTGGTCCAGCACGGTGCCGTAGATCGTCCGCTCA 38317 || |||||||| || || || |||||||||||||||| |||||||||||| |||||||| Sbjct 100 TAGGGGTGGACGCGGTCCCCGACCAGGTGGTCCAGCAGGGTGCCGTAGATGGTCCGCTCG 41 Query 38318 CCGTTGAACGCCTTGATCGTCCGGCACAGCTCGGCAGC 38355 ||||| | || ||||||||||||||||||||| || Sbjct 40 CCGTTCATGGCGAGGATCGTCCGGCACAGCTCGGCGGC 3 >seq693470 Length=100 Score = 107 bits (118), Expect = 7e-19 Identities = 83/99 (84%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 35690 GTGCAGCGCCGTGCCTTCATCGGCCATCTTGTACGCCTCGGCCACGTCCTGCGCGGCCTC 35749 ||||||||| ||||| || |||||||||||||||||||||||| ||||||| || ||| Sbjct 100 GTGCAGCGCGGTGCCCTCGTCGGCCATCTTGTACGCCTCGGCCTCGTCCTGGGCCTTCTC 41 Query 35750 ACAGATGTTGTTCAGGCGTTCGCGGTCCACCTTCACGTC 35788 || ||| ||| | ||| ||||||||| |||||||||| Sbjct 40 GCACATGCGGTTGACGCGCTCGCGGTCCGCCTTCACGTC 2 >seq737403 Length=101 Score = 104 bits (114), Expect = 8e-18 Identities = 81/94 (86%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 35579 GGTCAGCCCGTTGGCCGCCAGCGCGTCCAGGTACATCCGGACCTTCCGGCGGTGCTGCGT 35638 |||||||||||||||| | |||||||| ||||||| |||||||||||||||| | || Sbjct 100 GGTCAGCCCGTTGGCCCCGAGCGCGTCGAGGTACAGGGCGACCTTCCGGCGGTGCCG-GT 42 Query 35639 CGGCA-CCCGGTTCAGGTCCCCGCCCGCGTAGTC 35671 ||| | ||||||| ||||| |||||||||||||| Sbjct 41 CGGGAACCCGGTTGAGGTCGCCGCCCGCGTAGTC 8 >seq1159256 Length=121 Score = 102 bits (112), Expect = 3e-17 Identities = 95/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 40545 CCAGGGCGTCCACCTCGGCTTCCGTCGCACCCTCGGGGCGCAGTGCGTCCCGCAGCCACG 40604 ||||||| ||||| ||| |||| ||||| || ||||||| |||||||||||||| | Sbjct 1 CCAGGGCTTCCACGGTGGCGTCCGAGGCACCGTCCTGGCGCAGGGCGTCCCGCAGCCAGG 60 Query 40605 CGTCATAGTTCGGCGTCGCGGTGTCCGGCTCGTACGCGGCGGTCACCTGGACGTACGACA 40664 |||| ||| ||| |||| |||| || ||||||| | ||||||||||||||||| | Sbjct 61 CGTCGTAGACCGGGGTCGGCATGTCGGGGTCGTACGGAACCGTCACCTGGACGTACGAGA 120 Query 40665 G 40665 | Sbjct 121 G 121 >seq682472 Length=100 Score = 96.9 bits (106), Expect = 1e-15 Identities = 80/93 (86%), Gaps = 5/93 (5%) Strand=Plus/Minus Query 41678 GGTGGTACCCTTCGGTTGTTGGTGGTGT-CTTCTTCGCGGTTGTCGCTACAACATCAGGG 41736 |||| ||||||||||| |||||||| || ||||||||||||||||| ||||| | ||| Sbjct 99 GGTGATACCCTTCGGTCGTTGGTGGCGTGCTTCTTCGCGGTTGTCGTCGCAACA-CCGGG 41 Query 41737 GCCGGTTCCT--TCGGGGG-TCGGCCCCTTCGC 41766 |||||||||| ||||||| |||||||||||| Sbjct 40 GCCGGTTCCTTGTCGGGGGACCGGCCCCTTCGC 8 >seq705999 Length=100 Score = 82.4 bits (90), Expect = 3e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 35271 GCCAGGTCCACCCAGTACACCGTGACTTCGTCGCGGGTGCTCGGCAGGTGGACGACGACG 35330 |||||||| | || |||||||| ||| ||||||||||| |||||||||||||||||| Sbjct 3 GCCAGGTCGATCCGGTACACCGCGACCTCGTCGCGGGTCGACGGCAGGTGGACGACGACC 62 Query 35331 CCGAAGTCATGGCTGACC 35348 ||||||| | || |||| Sbjct 63 GCGAAGTCGTCGCGGACC 80 >seq686436 Length=100 Score = 82.4 bits (90), Expect = 3e-11 Identities = 79/99 (80%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 8600 CGGGTGTGGAAGCCGTCCCCGCGCCGCCGCGCGC-AGGCGACCAGCCCCGTCATCAGGTC 8658 || || ||||||||||| || ||||||||| ||| |||| || |||||||||||| | Sbjct 100 CGCGTCTGGAAGCCGTCGCCCCGCCGCCGC-CGCGAGGCCACGTCGCCCGTCATCAGGGC 42 Query 8659 CCTGGTCATCCTGGAAGAACTGCGGCTGCTGAACGCGGC 8697 |||| |||||||||| ||||| |||| |||||||| Sbjct 41 CCTGACGGTCCTGGAAGAGCTGCGCGTGCTCAACGCGGC 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 179213266454620