Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_028827.1 Length=50165 Score E Sequences producing significant alignments: (Bits) Value seq644464 322 2e-83 seq653325 170 6e-38 >seq644464 Length=2640 Score = 322 bits (356), Expect = 2e-83 Identities = 671/988 (68%), Gaps = 16/988 (2%) Strand=Plus/Minus Query 39014 GTGAGCACGGCCGCCATGTACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAG 39073 ||||||| || ||||| || || || || || |||| |||||| |||||||| | || Sbjct 2073 GTGAGCAATGCTGCCATATATTCTGCAGGATAATGCGCCTTCAGATACGCCGTCCAATAA 2014 Query 39074 GCGATGAGCCCGTACGCCGCAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACG 39133 || | ||||| || || ||||| |||||||| || || || | | ||| || | Sbjct 2013 CTGAGCACACCGTAGGCTGCCGAGTGAGCCTTGTTAAACGCATAATCAGAGAACGGCAAC 1954 Query 39134 AGCACGTCCCACACCGCCTGGATGGCGCTGTCCGAGTAGCCTCGCTCGCGCGCTCCCTTC 39193 || | |||||||| | || | ||| || || | || | | || | || | Sbjct 1953 AGGATGTCCCACAGTGTCTTTACTGCGTCTTCAGAAAAACCATTCGTG-GCCATACCGGC 1895 Query 39194 TGGAAGTTCA-CGAACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATGGCCCGACG 39252 || || ||| || ||| || | || | || ||| ||||| ||||| || || || Sbjct 1894 TGCAAAATCAGCGTACTGTTTATCGAGCTCTTCTTTCTTTTTCTTTCCCATTGCGCGCCG 1835 Query 39253 CAGCAGGTCGGCCTGGCCCAGGCTGTAGCCAGCGAGGATCTGCGC---CGCCTTCTGCAC 39309 ||| | || || ||||| || | | || || | ||| || |||| | || Sbjct 1834 CAGAATATCAGCTTGGCCGAGTGAGAATCCCGCTACCCGCTGTGCAATCGCCATA---AC 1778 Query 39310 CTGCTCCTGGTAGATGATGAGCCCGTACGTCGGGTCCAGGATCTCCCGCAGGGGCTCCTC 39369 ||| |||||||| |||||||||||||| || | |||||||| || |||| |||||| | Sbjct 1777 CTGTTCCTGGTAAATGATGAGCCCGTAGGTGGTATCCAGGATGTCTCGCAACGGCTCCGC 1718 Query 39370 CACCTCGGGGTGAATCGGCGAGATCGCCTGCTGTCCATTCTTCCGGAGGGCATAGTTCGT 39429 || ||||| |||||||||| | | | || || |||||||| || || || |||||||| Sbjct 1717 CAGTTCGGGATGAATCGGCGTGTTTTCTTGTTGCCCATTCTTGCGCAGCGCGTAGTTCGT 1658 Query 39430 GTGTGAGCCAACGCCCATCGGACCCGGACGGTACAGCGCGACGACGGCCGAGATGTCCTC 39489 |||||| | |||||||||||||| ||||||| ||||| || || || |||||||| Sbjct 1657 GTGTGAATTCGCCCCCATCGGACCCGGTCGGTACAACGCGATAACCGCGGAAATGTCCTC 1598 Query 39490 GAAGTTGTCGGGCTTCAGCAGGCGGAGCAGGGAGCGCATCGCACCGCCGTCGAGCTGGAA 39549 |||| |||| || |||| || || ||||| | ||||||| |||||||||||||||||| Sbjct 1597 GAAGGTGTCCGGTTTCAACAATCGCAGCAGTGCCCGCATCGGACCGCCGTCGAGCTGGAA 1538 Query 39550 CACCGAGAGCGTGTCACCCTTGGCCAGCAGCTCGTAG--GTCGGGGCGTCGTCCAGCGGG 39607 || ||| ||||||||| ||| |||||| ||||| ||| || ||| ||||| | Sbjct 1537 TACGCCGAGTGTGTCACCCCGGGCGAGCAGCGCGTAGGCGTCCGG--GTCATCCAGTGCC 1480 Query 39608 ATGTTCTCCAGGTCGACGTGCTCCCCACGGTTACGACG-GATGTTCTCGACGGCGTCGCC 39666 | | ||||| || |||| | ||||| || | | || |||| ||||| | Sbjct 1479 AGCTCTTCCAGCACGGGTCGCTCGCTGCGGTT-GGAGGCAACATTGTCGAGCGCGTCATC 1421 Query 39667 CATGATCGTGAGGTTCCGCAGGCCGAGGAAGTCCATCTTGACCGCGCCCATGCTCTCGCA 39726 || ||||||||||| ||||| ||||| ||||||||||| | ||| | |||||| Sbjct 1420 GATAATCGTGAGGTTTCGCAGCCCGAGAAAGTCCATCTTCATAAGGCCGAGCGCCTCGCA 1361 Query 39727 CTGGGGGTAGTCCCACTGCGTGACGGTGACGCCGTCCGCAGGACGGACCCACACCGGAAG 39786 | || |||| |||| |||||| | ||||||| || | | ||| | Sbjct 1360 CGACGGAAAGTCAAACTGGGTGACGATTTGGCCGTCCTGTTCCCGTTTCATAATCGGGAT 1301 Query 39787 GTGATCGACCAGGGGCTCGTTGGACATGATCACACCGGCCGCGTGCACGCCCATCTGGCG 39846 | || | || || || | |||||||| ||||||||||||||||| ||| ||| || Sbjct 1300 GATGTCAATGAGCGGATCACTCGACATGATGACACCGGCCGCGTGCACACCCCACTGTCG 1241 Query 39847 AACCAGACCTTCGAGCCCGAGCGCAGTGTCGATCACCTCCTTCGAGTCCTTGTCGTTCTC 39906 || ||| | ||| | || ||||| | |||| ||| | ||| | | ||| Sbjct 1240 CTTAAGGTTTTCTAACCCAACGGCGGTGTCAAACACCGTCTTGGCATCCGAATTTTCCTC 1181 Query 39907 GTACAGGCCCCGGATCTCGCCCGCCTCGTCGTAGCGCGGGTGCTCCGGGTTGAAGATCCC 39966 || ||| || |||||||| || | || | || |||||||| | || || || Sbjct 1180 AATAAGCTGCCGAATATCGCCCGCTTCTTTATATCTGGGATGCTCCGGAGTAAAAATACC 1121 Query 39967 CTCCAGGGGCATCGACGCG-CCCATCAC 39993 | || |||| || | | |||||||| Sbjct 1120 CGAGAGTGGCA-CGTCTTGCCCCATCAC 1094 Score = 152 bits (168), Expect = 2e-32 Identities = 195/269 (72%), Gaps = 0/269 (0%) Strand=Plus/Minus Query 40145 CGGATGACCTCGCCGCGACGCCGGTCATCGAAGTCGATGTCAACGTCGGGCATGGACACG 40204 || || ||||| || || || || || || || |||| || | ||||||||| || || Sbjct 996 CGAATAACCTCACCCCGTCGGCGCTCGTCAAAATCGACATCGAAGTCGGGCATTGAGACA 937 Query 40205 CGCTCGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCTCCAGTGGATCGAGGTCGGTG 40264 || || ||||| ||||| || ||||||||||| ||||| || || || |||||||| ||| Sbjct 936 CGATCCGGGTTGAGGAAGCGTTCGAAGATGAGACCGTGTTCAAGCGGGTCGAGGTCAGTG 877 Query 40265 ATCCCGAGGCAGTAGGCGACCAGCGAACCGGCTGCCGAGCCTCGCCCAGGACCGACCCAC 40324 |||| | | ||| ||| ||| |||||||| | || || || || || || || | Sbjct 876 ATCCGCATGGCGTACGCGGCCATTGAACCGGCACCAGACCCGCGGCCCGGGCCCACTCGA 817 Query 40325 ACGCCGTTCTCCTTGGCCCAGCCGATGAAGTCGGCGACGACCAGGAAGTAGGACGGGAAG 40384 | || || | ||| | |||| ||||| || ||||| || ||||||||| ||||| Sbjct 816 ATTCCATTGTTCTTCGACCAGTTAATGAAATCCGCGACAACGAGGAAGTAGCCGGGGAAC 757 Query 40385 CCCATCTGGATGATCATGTCGATCTCGTA 40413 |||||||| |||| | || | |||||| Sbjct 756 CCCATCTGAGTGATGACCTCAACCTCGTA 728 >seq653325 Length=6560 Score = 170 bits (188), Expect = 6e-38 Identities = 270/381 (71%), Gaps = 12/381 (3%) Strand=Plus/Minus Query 40041 TGTCCAGCACGCGGGCCGCGTCCTTCATCGCG---TTGCGCGCCTTGATCCGGCCGAAGG 40097 |||||| ||| ||| || |||| |||||| ||| ||| || | | |||||| Sbjct 1198 TGTCCATCACCCGGCCCACGTCGCGGATCGCGGCCTTGGCGGCCATGGTTC---CGAAGG 1142 Query 40098 TCCCGATCTGTGCGACCTTGTCGGCCCCGTACTTCTCGGTGACGTACCGGATGACCTCGC 40157 | ||||||| || ||| |||||||| || ||||||| ||| || | Sbjct 1141 TGGCGATCTGGCTCACGGCGTCCTTGCCGTACTTGTCCTTGACGTAATCGATCACGCGGT 1082 Query 40158 CGCGAC--GCCGGTCATCGAAGTCGATGTCAACGTCGGGCATGGACACGCGCTCGGGGTT 40215 |||| ||| | || || |||||||| | ||| ||||| || || || |||||||| Sbjct 1081 CGCGGTTGGCCTGGCAA--AAATCGATGTCGAAGTCCGGCATCGATACCCGTTCGGGGTT 1024 Query 40216 CAGGAACCGCTCGAAGATGAGCCCGTGCTCCAGTGGATCGAGGTCGGTGATCCCGA-GGC 40274 |||||| |||||||| | || || ||||| || ||||||||||||||||| | ||| Sbjct 1023 CAGGAAGCGCTCGAACAGCAGTTTGTATTCCAGCGGGTCGAGGTCGGTGATCCCCATGGC 964 Query 40275 AGTAGGCGACCAGCGAACCGGCTGCCGAGCCTCGCCCAGGACCGACCCACACGCCGTTCT 40334 | ||||| |||||||| ||||| | || || ||||| || |||||| ||| || | Sbjct 963 A-TAGGCCACCAGCGAGCCGGCGCCGGAACCGCGCCCCGGCCCGACCGGGCAGCCATTGT 905 Query 40335 CCTTGGCCCAGCCGATGAAGTCGGCGACGACCAGGAAGTAGGACGGGAAGCCCATCTGGA 40394 | ||||||| |||||||| |||||| |||||||||| || |||||||||| || Sbjct 904 TCCTGGCCCACTGTATGAAGTCCCCGACGATCAGGAAGTAGCCCGCAAAGCCCATCTCGA 845 Query 40395 TGATCATGTCGATCTCGTACT 40415 ||| | |||||||| ||| Sbjct 844 CGATGGTCCCGATCTCGAACT 824 Score = 163 bits (180), Expect = 9e-36 Identities = 229/318 (72%), Gaps = 4/318 (1%) Strand=Plus/Minus Query 39033 ACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGCCCGTACGCCG 39092 ||||||||| ||| ||| |||||| | ||||| ||||||| | || ||| || | Sbjct 2209 ACTCGGCCGTGTAATGCACCTTCAGCCAGCCCGTGTGGTAGGCCAGCAGGGAGTAAGCGG 2150 Query 39093 CAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCCCACACCGCCT 39152 ||| ||||| |||||||||| |||| ||||| || | | || ||| ||||| | | Sbjct 2149 CAGCGTGCGACTTGTTGAAGCCGTAGCCGGCAAACTTCTCCATCAGGTCGAACACCTCGT 2090 Query 39153 -GGATGGCGC-TGTCCGAGTAGCCTCGCTCGCGCGCTCCCTTCTGGAAGTTCACGAACTC 39210 || | | | || | |||| ||| || ||| ||||| ||||| | || | Sbjct 2089 CGGCTTTCTCCTGGCTGAGT--CCTTTTTCCGCCGCCCCCTTGCGGAAGATGGCGCGGTG 2032 Query 39211 CTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATGGCCCGACGCAGCAGGTCGGCCTGGCC 39270 || ||||| |||||| || ||||||||||||||||| ||||||| |||||| ||| Sbjct 2031 CTCGGCCATCTCCTCGGCTTTTTTCTTGCCCATGGCCCGGCGCAGCATGTCGGCGCCGCC 1972 Query 39271 CAGGCTGTAGCCAGCGAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGAG 39330 |||||||||||| |||| | ||| || | || | ||||||||||||||||| |||| Sbjct 1971 CAGGCTGTAGCCGCCGAGCAACTGGGCGGTCTGCATCACCTGCTCCTGGTAGACCATGAT 1912 Query 39331 CCCGTACGTCGGGTCCAG 39348 |||||| ||| | |||| Sbjct 1911 CCCGTAGGTCTCGGCCAG 1894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157245289822698