Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_028892.1 Length=49949 Score E Sequences producing significant alignments: (Bits) Value seq644464 360 6e-95 seq653325 141 3e-29 seq1656622 105 2e-18 >seq644464 Length=2640 Score = 360 bits (398), Expect = 6e-95 Identities = 630/911 (69%), Gaps = 12/911 (1%) Strand=Plus/Minus Query 37849 AGGACCCGAAGGCCCATGCGCCTGCACTCGCCGAGGTACGTGGCCATCTTGTTCTTGTCG 37908 || ||||||| ||||| || | |||||| ||| ||| || | || | | | | Sbjct 2145 AGCACCCGAATCCCCATCCGGCGACACTCGTTGAGATACACTGCTAGTTTATCCCGGGCA 2086 Query 37909 TCGCCCACCGAGGTGAGCACGGCCGCCATGTACTCGGCCGGGTAGTGCGTCTTCAGGTAC 37968 || || || ||||||| || ||||| || || || || || |||| |||||| ||| Sbjct 2085 TCCCCGACGCTCGTGAGCAATGCTGCCATATATTCTGCAGGATAATGCGCCTTCAGATAC 2026 Query 37969 GCCGTGCGGTAGGCGATGAGTCCGTACGCCGCAGAGTGCGCCTTGTTGAAGGCGTACCCG 38028 ||||| | || || | ||||| || || ||||| |||||||| || || || | Sbjct 2025 GCCGTCCAATAACTGAGCACACCGTAGGCTGCCGAGTGAGCCTTGTTAAACGCATAATCA 1966 Query 38029 GCGAAGGGTACGAGCACGTCCCACACCGCCCGGATGGCAGCCTCCGAGTAGCCTCGCTCG 38088 | ||| || | || | |||||||| | | | || | || || | || ||| Sbjct 1965 GAGAACGGCAACAGGATGTCCCACAGTGTCTTTACTGCGTCTTCAGAAAAACCAT--TCG 1908 Query 38089 CTCGCCC--CCTTCTGGAAGTTCA-CGAACTCCTTGGCCAGCACCTCGGGCTTCTTCTTG 38145 | ||| || ||| || ||| || ||| || | ||| | || ||| ||||| Sbjct 1907 -TGGCCATACCGGCTGCAAAATCAGCGTACTGTTTATCGAGCTCTTCTTTCTTTTTCTTT 1849 Query 38146 CCCATGGCGCGACGGAGGAGGTCGGCCTGACCGAGGGTGTACCCGGCCAGGATCTGCGC- 38204 ||||| ||||| || || | || || || ||||| | | | || || | ||| || Sbjct 1848 CCCATTGCGCGCCGCAGAATATCAGCTTGGCCGAGTGAGAATCCCGCTACCCGCTGTGCA 1789 Query 38205 --CGCCTTCTGCACCTGCTCCTGGTAGATGATGAGCCCGAAGGTCGGGTCCAGGATCTCG 38262 |||| | ||||| |||||||| |||||||||||| |||| | |||||||| || Sbjct 1788 ATCGCCATA---ACCTGTTCCTGGTAAATGATGAGCCCGTAGGTGGTATCCAGGATGTCT 1732 Query 38263 GCCAGCGGCTCCTCCACCTCGGGGTGGATCGGCGTGATCTCCTGCTGACCGTTCTTGCGG 38322 || ||||||| ||| ||||| || ||||||||| | || || || || |||||||| Sbjct 1731 CGCAACGGCTCCGCCAGTTCGGGATGAATCGGCGTGTTTTCTTGTTGCCCATTCTTGCGC 1672 Query 38323 AGGGCGTAGTTCGTGTGCGAGCCCATGCCCATCGGACCCGGACGGTACAGCGCGACGACG 38382 || |||||||||||||| || | |||||||||||||| ||||||| ||||| || Sbjct 1671 AGCGCGTAGTTCGTGTGTGAATTCGCCCCCATCGGACCCGGTCGGTACAACGCGATAACC 1612 Query 38383 GCCGAGATGTCCTCGAACTGGTCCGGCTTCAGCAGGCGAAGCAGGGAGCGCATCGCGCCG 38442 || || ||||||||||| |||||| |||| || || ||||| | ||||||| ||| Sbjct 1611 GCGGAAATGTCCTCGAAGGTGTCCGGTTTCAACAATCGCAGCAGTGCCCGCATCGGACCG 1552 Query 38443 CCGTCGAGCTGGAAGACCGAGAGGGTGTCGCCCCTGGCCAGCAGCTCGTAGGTTGCCGGG 38502 |||||||||||||| || ||| ||||| |||| ||| |||||| |||||| ||||| Sbjct 1551 CCGTCGAGCTGGAATACGCCGAGTGTGTCACCCCGGGCGAGCAGCGCGTAGGCGTCCGGG 1492 Query 38503 TCGTCCAGCGGGATGTTCTCGATGTCGACGTGCTCACCACGGTTGCGGCGGATGTTCTCG 38562 || ||||| | | | || | || |||| | |||||| | | || ||| Sbjct 1491 TCATCCAGTGCCAGCTCTTCCAGCACGGGTCGCTCGCTGCGGTTGGAGGCAACATTGTCG 1432 Query 38563 ACCGCGTCGCCCATGATCGTGAGGTTCCGGAGCCCGAGGAAGTCCATCTTCAGCAGGCCC 38622 | |||||| | || ||||||||||| || |||||||| ||||||||||||| ||||| Sbjct 1431 AGCGCGTCATCGATAATCGTGAGGTTTCGCAGCCCGAGAAAGTCCATCTTCATAAGGCCG 1372 Query 38623 AGGGCCTCGCAGCTCGGGTAGTCGAACTGCGTGATCGTCACGCCGTCCGCAGGCCGCACC 38682 || |||||||| ||| |||| ||||| |||| | ||||||| ||| | Sbjct 1371 AGCGCCTCGCACGACGGAAAGTCAAACTGGGTGACGATTTGGCCGTCCTGTTCCCGTTTC 1312 Query 38683 CACGTAGGGATGTGGTCGACCAGCGGCTCGTCAGACATGATCACACCGGCTGCGTGCACG 38742 | |||||| ||| | ||||| || |||||||| |||||||| |||||||| Sbjct 1311 ATAATCGGGATGATGTCAATGAGCGGATCACTCGACATGATGACACCGGCCGCGTGCACA 1252 Query 38743 CCCATCTGCCG 38753 ||| ||| || Sbjct 1251 CCCCACTGTCG 1241 Score = 179 bits (198), Expect = 1e-40 Identities = 210/284 (74%), Gaps = 0/284 (0%) Strand=Plus/Minus Query 39052 CGGATCACGTCGCCACGGCGACGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACA 39111 || || || || || || || || || || || |||| || | ||||||||| |||||| Sbjct 996 CGAATAACCTCACCCCGTCGGCGCTCGTCAAAATCGACATCGAAGTCGGGCATTGAGACA 937 Query 39112 CGCTCAGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTG 39171 || || ||||| ||||| || ||||||||||| ||||| | ||||| ||||| ||| Sbjct 936 CGATCCGGGTTGAGGAAGCGTTCGAAGATGAGACCGTGTTCAAGCGGGTCGAGGTCAGTG 877 Query 39172 ATCCCGAGGGCGTACGCGGCCAGCGAGCCAGCCGCAGAGCCGCGCCCAGGGCCGACCCAC 39231 |||| | |||||||||||||| || || || |||| ||||| || ||||| || | Sbjct 876 ATCCGCATGGCGTACGCGGCCATTGAACCGGCACCAGACCCGCGGCCCGGGCCCACTCGA 817 Query 39232 ACGCCGTTCTCCTTCGCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAAC 39291 | || || | ||||| |||| ||||| || ||||| ||||||||||| |||||| Sbjct 816 ATTCCATTGTTCTTCGACCAGTTAATGAAATCCGCGACAACGAGGAAGTAGCCGGGGAAC 757 Query 39292 CCCATCTGGTTGATCATGTCGATCTCGTACTCGACCTGCGTGCG 39335 |||||||| |||| | || | |||||| | | |||| || || Sbjct 756 CCCATCTGAGTGATGACCTCAACCTCGTAGTTGGCCTGTGTCCG 713 >seq653325 Length=6560 Score = 141 bits (156), Expect = 3e-29 Identities = 262/381 (69%), Gaps = 10/381 (3%) Strand=Plus/Minus Query 38948 TGTCCAGCACGCGGGCCGCGTCCTTCATCGCG---TTGCGCGCCTTGATCCGTCCGTACG 39004 |||||| ||| ||| || |||| |||||| ||| ||| || | |||| | | Sbjct 1198 TGTCCATCACCCGGCCCACGTCGCGGATCGCGGCCTTGGCGGCCATGGT---TCCGAAGG 1142 Query 39005 TCGCGATCTGTGCGACCTTGTCACTGCCGTACTTCTCGGTGACGTACCGGATCACGTCGC 39064 | |||||||| || ||| |||||||||| || ||||||| ||||||| | Sbjct 1141 TGGCGATCTGGCTCACGGCGTCCTTGCCGTACTTGTCCTTGACGTAATCGATCACGCGGT 1082 Query 39065 CACGGC--GACGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACACGCTCAGGGTT 39122 | ||| | | | || || |||||||| | ||| ||||| || || || || ||||| Sbjct 1081 CGCGGTTGGCCTGGCAA--AAATCGATGTCGAAGTCCGGCATCGATACCCGTTCGGGGTT 1024 Query 39123 CAGGAACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGC 39182 |||||| |||||||| | || || | ||||| |||||||||||||| | ||| Sbjct 1023 CAGGAAGCGCTCGAACAGCAGTTTGTATTCCAGCGGGTCGAGGTCGGTGATCCCCATGGC 964 Query 39183 GTACGCGGCCAGCGAGCCAGCCGCAGAGCCGCGCCCAGGGCCGACCCACACGCCGTTCTC 39242 || || |||||||||| || | || |||||||| || |||||| ||| || | Sbjct 963 ATAGGCCACCAGCGAGCCGGCGCCGGAACCGCGCCCCGGCCCGACCGGGCAGCCATTGTT 904 Query 39243 CTTCGCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTT 39302 | | ||||| |||||||| |||||| |||||||| || || ||||||| | Sbjct 903 CCTGGCCCACTGTATGAAGTCCCCGACGATCAGGAAGTAGCCCGCAAAGCCCATCTCGAC 844 Query 39303 GATCATGTCGATCTCGTACTC 39323 ||| | |||||||| |||| Sbjct 843 GATGGTCCCGATCTCGAACTC 823 Score = 138 bits (152), Expect = 4e-28 Identities = 236/337 (70%), Gaps = 9/337 (3%) Strand=Plus/Minus Query 37940 ACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGTCCGTACGCCG 37999 ||||||||| ||| ||| |||||| | ||||| ||||||| | || ||| || | Sbjct 2209 ACTCGGCCGTGTAATGCACCTTCAGCCAGCCCGTGTGGTAGGCCAGCAGGGAGTAAGCGG 2150 Query 38000 CAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCCCACACCGCC- 38058 ||| ||||| |||||||||| |||| ||||| || | | || ||| ||||| | Sbjct 2149 CAGCGTGCGACTTGTTGAAGCCGTAGCCGGCAAACTTCTCCATCAGGTCGAACACCTCGT 2090 Query 38059 CGGATGGCAGCCT--CCGAGTAGCCTCGCTCGCTCGCCCCCTTCTGGAAGTTCACGAACT 38116 ||| | | ||| | |||| ||| || ||||||||| ||||| | || | Sbjct 2089 CGGCTTTCT-CCTGGCTGAGT--CCTTTTTCCGCCGCCCCCTTGCGGAAGATGGCGCGGT 2033 Query 38117 CCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGGAGGTCGGCCTGAC 38176 || ||||| | |||||| || |||||||||||||| || || || | |||||| | Sbjct 2032 GCTCGGCCATCTCCTCGGCTTTTTTCTTGCCCATGGCCCGGCGCAGCATGTCGGCGCCGC 1973 Query 38177 CGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGA 38236 | ||| |||| ||| | || | ||| || | || | ||||||||||||||||| |||| Sbjct 1972 CCAGGCTGTAGCCGCCGAGCAACTGGGCGGTCTGCATCACCTGCTCCTGGTAGACCATGA 1913 Query 38237 GCCCGAAGGTCGGGTCCAGGA---TCTCGGCCAGCGG 38270 |||| ||||| | |||| | |||| ||||||| Sbjct 1912 TCCCGTAGGTCTCGGCCAGCACCGACTCGACCAGCGG 1876 >seq1656622 Length=840 Score = 105 bits (116), Expect = 2e-18 Identities = 148/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 40123 CCCGGTGCGACGTACGCCTCGATCCCGATGATGGGCTTGAC-CCCAGCGGCCTGCCCCTG 40181 ||||||| || ||||||||| | |||||||||||||| || ||| || | || || | Sbjct 21 CCCGGTGTGAGATACGCCTCGGTGCCGATGATGGGCTTCACACCCTGCAGGGTGGCCTTT 80 Query 40182 CGTGAAGAAGTCGTACGCACCATGCAGGTTGCCGTGGTCGGTCATCGCGAGGGCTCTCAT 40241 | |||| ||| |||| || || |||||||||||||| ||||||| ||| |||| Sbjct 81 T-TCCAGAAATCGAACGCGCCGAACATATTGCCGTGGTCGGTGATCGCGATGGCCGTCAT 139 Query 40242 GCCCTGCGCCTTGGCCTCGGCGAACATGTCCTTCAGCCGAGCCGCCCCGTCGAGCAGGCT 40301 ||||||||| || | | || | || || ||||| || |||||||||| Sbjct 140 ACCCTGCGCCCGGGTAGCCGAGATAAGCTCGGCCACTCGAGCGGCACCGTCGAGCATTGA 199 Query 40302 GTACTCGGAGTGGACATGCAGGTGA 40326 ||||||| ||| || ||||||||| Sbjct 200 ATACTCGGTGTGCACGTGCAGGTGA 224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156567711220314