Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_028931.1 Length=55108 Score E Sequences producing significant alignments: (Bits) Value seq642390 147 8e-31 seq1606471 105 2e-18 >seq642390 Length=3645 Score = 147 bits (162), Expect = 8e-31 Identities = 443/668 (66%), Gaps = 27/668 (4%) Strand=Plus/Plus Query 4338 CGAGCTGTGGGA-CGCTGTCATGCGCTCCACCTGGGACTGGGCCGAGCCGGGCGTCCTGT 4396 || ||||||||| ||| ||||||| || ||| |||| |||||||||||| |||||| Sbjct 1283 CGCGCTGTGGGAGCGCA-TCATGCGTTCGGCCTACGACTATGCCGAGCCGGGCATCCTGT 1341 Query 4397 TCATCGACACCATCAACCGCATGAACAATCTCTGGTACTGCGAGGAGATTGCGGCCACCA 4456 || | | | ||||||| ||||| || ||||||||| || ||||||||| Sbjct 1342 TCCTGGGCCGCATCAACGAGGACAACAACCTGCATTACTGCGAGACCATCACGGCCACCA 1401 Query 4457 ACCCGTGCGGCGAGCAGCCGCTGCCTCCGTTCGGCGCCTGCCTGCTTGGCTCCTTCAACC 4516 |||| |||||||||||||| |||||| | | ||| |||| || ||| || ||| || Sbjct 1402 ACCCCTGCGGCGAGCAGCCCCTGCCTGCCTATGGCTGCTGCGACCTGGGCCCCGTCATCC 1461 Query 4517 TGGTGCGCTATCTGCGGCGCGACATGG---TTGGCTG------GTCCTTCGAC-TGGTGC 4566 || |||| |||| | | | | ||||| | | | |||||| | | | Sbjct 1462 TGCCCCGCTTCGTGCGCCACCCTTTTGGCTTTGGCGGTGCCGCGGCTTTCGACTTCGAGG 1521 Query 4567 CAGCTCGCCGAGGACATCCCGGTCGTCGTGCGCGCCATGGACAACGTGGTCGACCGGGCC 4626 | |||| ||| | | || | ||||| || ||||||| ||| |||||| | || Sbjct 1522 C-TTTCGCGCAGGCCGTGGCGTTGCAGGTGCGGGCGCTGGACAATGTGCTCGACCTGACC 1580 Query 4627 CGCTACCCGTTGCCGCAGCAGGAGCAGGAGGCGAGGTCCAAACGCCGGATGGGCCTGGGT 4686 | ||| ||||||||||| ||||||| | | |||| ||||| || ||| |||| Sbjct 1581 TATTGGCCGCTGCCGCAGCAGCGCGAGGAGGCCATGGCCAAGCGCCGCATCGGCGTGGGC 1640 Query 4687 GTGACCGCCCTGGCGA--ACGCGGGCGAGGCCCTGGGCCACCCCTACGGCTCGCCCGGCT 4744 | |||| ||||| | |||| ||| | | ||| ||| | ||||| | ||||| Sbjct 1641 TTTACCGGCCTGGGCAACACGCTGGCCATG--CTGTGCCTGCGCTACGACCGGCCCGAGG 1698 Query 4745 TCCTGGACTTCACCCGCCGC-GTGCTGACGATG-GTGCGCGACGAGTCCTACCGCGCGTC 4802 || | | | | ||| ||| || || ||||||| | | || |||||||| Sbjct 1699 GCCGCGCCATGGCGGTGCGCATTGC--CCGGTGCATGCGCGATGCCGCTTATCGCGCGTC 1756 Query 4803 GGCCCTGTTGGCCCATGAGAAGGGCTCCTTCCCGCTCTTCGAGGCCGAGCAGTACCTGG- 4861 || | |||| | ||||| || ||||||| | ||| |||| || |||||||| Sbjct 1757 GGTCGACCTGGCACGCGAGAAAGGGGCCTTCCCCCACTTTTCTGCCGGGCCGTACCTGGC 1816 Query 4862 AGTCCGCCTTCGTG-AAGAC-CCTGCCCGAGGACGTCCGCGAGATGATCGCCGAGCTGGG 4919 | ||| | || || | ||||||||||| || | |||| | ||| || Sbjct 1817 CGAGGGCCGTTTTGCCAGCCGCCTGCCCGAGGCGCTCAAGGCCGCGATCAGCCAGCATGG 1876 Query 4920 CATCCGCAACTCCCACCTGACCTCCATCGCGCCGACCGGCACCATCAGCCTG---TGCGC 4976 |||||||||| ||| ||| || ||||| || || |||||| |||||||| | || Sbjct 1877 CATCCGCAACAGCCATCTGCTGTCGATCGCCCCCACAGGCACCGTCAGCCTGGCTTTTGC 1936 Query 4977 CGACAACG 4984 |||||||| Sbjct 1937 CGACAACG 1944 >seq1606471 Length=311 Score = 105 bits (116), Expect = 2e-18 Identities = 130/178 (73%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 4341 GCTGTGGGACGCTGTCATGCGCTCCACCTGGGACTGGGCCGAGCCGGGCGTCCTGTTCAT 4400 ||||||||| | ||||| |||||| | || | |||||||| ||| || | |||| Sbjct 267 GCTGTGGGATGTGATCATGTCCTCCACGTATGATTTTGCCGAGCCCGGCTTCATCCTCAT 208 Query 4401 CGACACCATCAACCGCATGAACAATCTCTGGTACTGCGAGGAGATTGCGGCCACCAACCC 4460 || | |||| |||||||| ||||| |||||| || ||||||||||| Sbjct 207 TGATAAGGTCAATGAGATGAACAACAACTGGTTCTGCGAAACCATCCGCGCCACCAACCC 148 Query 4461 GTGCGGCGAGCAGCCGCTGCCTCCGTTCGGCGCCTGCCTGCTTGGCTCCTTCAACCTG 4518 || ||||||||||||||||| || | |||||||||||||| || ||| ||||| || Sbjct 147 TTGTGGCGAGCAGCCGCTGCCGCCTTATGGCGCCTGCCTGCTGGGTTCCATCAACTTG 90 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 172751174228180