Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_028943.1 Length=29237 Score E Sequences producing significant alignments: (Bits) Value seq284847 138 2e-28 >seq284847 Length=5870 Score = 138 bits (152), Expect = 2e-28 Identities = 268/394 (68%), Gaps = 4/394 (1%) Strand=Plus/Plus Query 21855 CATGCTTATTGGCTATGTACGCGTGTCAACAAATGACCAGAACACGGAATTGCAGCGTAA 21914 |||| | || ||||||| ||||| || || | || |||||| ||| |||| || | Sbjct 3098 CATGTTGATCGGCTATGCGCGCGTCTCGACGCAGGATCAGAACCTGGAGCTGCAACGCGA 3157 Query 21915 CGCGCTGGAGTGCGCAGGATGTGAGCTGATTTTTGAGGATAAAATCAGCGGCACTAAGTC 21974 || || || ||||| || | | || ||||| || | || ||||| | | Sbjct 3158 AGCCTTGACCAAGGCCGGATGCAAGAAGGTCTTCGAGGACAAGGTGAGTGGCACGCGGGC 3217 Query 21975 CGACCGACCGGGACTGAAAAAACTGCTCAGGACATTATC--GGAGGGGGATACACTGGTG 22032 ||||| || || || || |||| || || | |||||| || || ||||| Sbjct 3218 AGACCGGCCCGGCTTGTCCAAGACGCTC--GAAATGCTGCGGGAGGGCGACACCCTGGTT 3275 Query 22033 GTCTGGAAGCTGGACAGGCTGGGGCGTAATATGCGGCATCTGGTCATTCTGGTTGAGGAA 22092 ||||||||||| ||| || |||| || | ||| ||||| |||||| | || Sbjct 3276 GTCTGGAAGCTCGACCGGTTGGGCCGGTCAGTCAAGCAACTGGTTGATCTGGTCGGCGAC 3335 Query 22093 CTGCGCGAACGCGGCGTTAATTTTCGCAGCCTGACGGATGCTATTGATACCAGCACGCCG 22152 |||| | | | ||||| | || | |||||||| ||| | || |||||| |||||||| Sbjct 3336 CTGCACAAGCATGGCGTCCAGTTCAGGAGCCTGACCGATTCCATCGATACCGGCACGCCG 3395 Query 22153 ATGGGGCGTTTTTTCTTTCATGTGATGGGTGCCCTGGCTGAAATGGAACGAGAACTCATT 22212 ||||| |||||||| || || |||| |||||| |||||||| || || || | Sbjct 3396 TCCGGGCGGTTTTTCTTCCACGTCATGGCGAGCCTGGCCGAAATGGAGCGCGAGCTGACC 3455 Query 22213 GTCGAGCGGACTCGGGCCGGGCTGGAAGCGGCCA 22246 |||||||| || || ||||||||||||| |||| Sbjct 3456 GTCGAGCGCACCCGCGCCGGGCTGGAAGTCGCCA 3489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 91595451902826