Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_028976.1 Length=50113 Score E Sequences producing significant alignments: (Bits) Value seq644464 370 3e-98 seq653325 131 5e-26 seq1656622 109 2e-19 >seq644464 Length=2640 Score = 370 bits (410), Expect = 3e-98 Identities = 697/1019 (68%), Gaps = 12/1019 (1%) Strand=Plus/Minus Query 38282 AGGACCCGAAGGCCCATGCGCCTGCACTCGCCGAGGTACGTGGCCATCTTGTTCTTGTCG 38341 || ||||||| ||||| || | |||||| ||| ||| || | || | | | | Sbjct 2145 AGCACCCGAATCCCCATCCGGCGACACTCGTTGAGATACACTGCTAGTTTATCCCGGGCA 2086 Query 38342 TCGCCCACCGAGGTGAGCACGGCCGCCATGTACTCGGCCGGGTAGTGCGTCTTCAGGTAC 38401 || || || ||||||| || ||||| || || || || || |||| |||||| ||| Sbjct 2085 TCCCCGACGCTCGTGAGCAATGCTGCCATATATTCTGCAGGATAATGCGCCTTCAGATAC 2026 Query 38402 GCCGTGCGGTAGGCGATGAGTCCGTACGCCGCAGAGTGCGCCTTGTTGAAGGCGTACCCG 38461 ||||| | || || | ||||| || || ||||| |||||||| || || || | Sbjct 2025 GCCGTCCAATAACTGAGCACACCGTAGGCTGCCGAGTGAGCCTTGTTAAACGCATAATCA 1966 Query 38462 GCGAAGGGTACGAGCACGTCCCACACCGCCCGGATGGCAGCGTCCGAGTAGCCTCGCTCG 38521 | ||| || | || | |||||||| | | | || | || || | || ||| Sbjct 1965 GAGAACGGCAACAGGATGTCCCACAGTGTCTTTACTGCGTCTTCAGAAAAACCAT--TCG 1908 Query 38522 CTTGC--TCCCTTCTGGAAGTTCA-CGAACTCCTTGGCCAGCACCTCGGGCTTCTTCTTG 38578 | || | || ||| || ||| || ||| || | ||| | || ||| ||||| Sbjct 1907 -TGGCCATACCGGCTGCAAAATCAGCGTACTGTTTATCGAGCTCTTCTTTCTTTTTCTTT 1849 Query 38579 CCCATGGCGCGACGGAGAAGGTCGGCCTGACCGAGGGTGTACCCGGCCAGGATCTGCGC- 38637 ||||| ||||| || |||| || || || ||||| | | | || || | ||| || Sbjct 1848 CCCATTGCGCGCCGCAGAATATCAGCTTGGCCGAGTGAGAATCCCGCTACCCGCTGTGCA 1789 Query 38638 --CGCCTTCTGCACCTGCTCCTGGTAGATGATGAGCCCGAAGGTCGGGTCCAGGATCTCG 38695 |||| | ||||| |||||||| |||||||||||| |||| | |||||||| || Sbjct 1788 ATCGCCATA---ACCTGTTCCTGGTAAATGATGAGCCCGTAGGTGGTATCCAGGATGTCT 1732 Query 38696 GCCAGCGGCTCCTCCACCTCGGGGTGGATCGGCGTGATCTCCTGCTGCCCGTTCTTGCGG 38755 || ||||||| ||| ||||| || ||||||||| | || || ||||| |||||||| Sbjct 1731 CGCAACGGCTCCGCCAGTTCGGGATGAATCGGCGTGTTTTCTTGTTGCCCATTCTTGCGC 1672 Query 38756 AGGGCGTAGTTCGTGTGCGAGCCCATGCCCATCGGACCCGGACGGTACAGCGCCACGACG 38815 || |||||||||||||| || | |||||||||||||| ||||||| ||| | || Sbjct 1671 AGCGCGTAGTTCGTGTGTGAATTCGCCCCCATCGGACCCGGTCGGTACAACGCGATAACC 1612 Query 38816 GCGGAGATGTCCTCGAACTGGTCCGGCTTCAGCAGGCGGAGCAGGGAGCGCATCGCGCCG 38875 ||||| ||||||||||| |||||| |||| || || ||||| | ||||||| ||| Sbjct 1611 GCGGAAATGTCCTCGAAGGTGTCCGGTTTCAACAATCGCAGCAGTGCCCGCATCGGACCG 1552 Query 38876 CCGTCGAGCTGGAACACCGAGAGCGTGTCGCCCCTGGCCAGCAGCTCGTACGTCGCGGGG 38935 |||||||||||||| || ||| ||||| |||| ||| |||||| |||| | | ||| Sbjct 1551 CCGTCGAGCTGGAATACGCCGAGTGTGTCACCCCGGGCGAGCAGCGCGTAGGCGTCCGGG 1492 Query 38936 TCATCCAGCGGGATGTTCTCGATGTCGACGTGCTCACCACGGTTGCGGCGGATGTTCTCG 38995 |||||||| | | | || | || |||| | |||||| | | || ||| Sbjct 1491 TCATCCAGTGCCAGCTCTTCCAGCACGGGTCGCTCGCTGCGGTTGGAGGCAACATTGTCG 1432 Query 38996 ACCGCGTCGCCCATGATCGTGAGGTTCCGGAGCCCGAGGAAGTCCATCTTCAGCAGGCCC 39055 | |||||| | || ||||||||||| || |||||||| ||||||||||||| ||||| Sbjct 1431 AGCGCGTCATCGATAATCGTGAGGTTTCGCAGCCCGAGAAAGTCCATCTTCATAAGGCCG 1372 Query 39056 AGAGCCTCGCAGCTCGGGTAGTCGAACTGCGTGATCGTTACGCCGTCCGCAGGCCGCACC 39115 || |||||||| ||| |||| ||||| |||| || ||||||| ||| | Sbjct 1371 AGCGCCTCGCACGACGGAAAGTCAAACTGGGTGACGATTTGGCCGTCCTGTTCCCGTTTC 1312 Query 39116 CACGTCGGGATGTGATCGACCAGCGGCTCGTCGGACATGATCACACCGGCTGCGTGCACG 39175 |||||||| || | ||||| || |||||||| |||||||| |||||||| Sbjct 1311 ATAATCGGGATGATGTCAATGAGCGGATCACTCGACATGATGACACCGGCCGCGTGCACA 1252 Query 39176 CCCATCTGCCGGACGAGACCTTCGAGGCCACGCGCGAGGTCAATGACCTCCTTCGCGTCC 39235 ||| ||| || || ||| | ||| ||| ||||| ||| ||| || ||| Sbjct 1251 CCCCACTGTCGCTTAAGGTTTTCTAACCCAACGGCGGTGTCAAACACCGTCTTGGCATCC 1192 Query 39236 TTGTCGTTCTCGTACAGCGCCCGGATCTCGCCCGCCTCGTCGTAGCGCGGGTGCTCCGG 39294 | | ||| ||| ||| || |||||||| || | || | || |||||||| Sbjct 1191 GAATTTTCCTCAATAAGCTGCCGAATATCGCCCGCTTCTTTATATCTGGGATGCTCCGG 1133 Score = 174 bits (192), Expect = 5e-39 Identities = 209/284 (74%), Gaps = 0/284 (0%) Strand=Plus/Minus Query 39485 CGGATCACGTCGCCACGGCGACGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACG 39544 || || || || || || || || || || || |||| || | ||||||||| ||||| Sbjct 996 CGAATAACCTCACCCCGTCGGCGCTCGTCAAAATCGACATCGAAGTCGGGCATTGAGACA 937 Query 39545 CGCTCAGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTG 39604 || || ||||| ||||| || ||||||||||| ||||| | ||||| ||||| ||| Sbjct 936 CGATCCGGGTTGAGGAAGCGTTCGAAGATGAGACCGTGTTCAAGCGGGTCGAGGTCAGTG 877 Query 39605 ATCCCGAGGGCGTACGCGGCCAGCGAGCCAGCCGCAGAGCCACGCCCAGGGCCGACCCAC 39664 |||| | |||||||||||||| || || || |||| || || || ||||| || | Sbjct 876 ATCCGCATGGCGTACGCGGCCATTGAACCGGCACCAGACCCGCGGCCCGGGCCCACTCGA 817 Query 39665 ACACCGTTCTCCTTCGCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAAC 39724 | || || | ||||| |||| ||||| || ||||| ||||||||||| |||||| Sbjct 816 ATTCCATTGTTCTTCGACCAGTTAATGAAATCCGCGACAACGAGGAAGTAGCCGGGGAAC 757 Query 39725 CCCATCTGGTTGATCATGTCGATCTCGTAGTCGACCTGCGTTCG 39768 |||||||| |||| | || | |||||||| | |||| || || Sbjct 756 CCCATCTGAGTGATGACCTCAACCTCGTAGTTGGCCTGTGTCCG 713 >seq653325 Length=6560 Score = 131 bits (144), Expect = 5e-26 Identities = 233/336 (69%), Gaps = 7/336 (2%) Strand=Plus/Minus Query 38373 ACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGTCCGTACGCCG 38432 ||||||||| ||| ||| |||||| | ||||| ||||||| | || ||| || | Sbjct 2209 ACTCGGCCGTGTAATGCACCTTCAGCCAGCCCGTGTGGTAGGCCAGCAGGGAGTAAGCGG 2150 Query 38433 CAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCCCACACCGCC- 38491 ||| ||||| |||||||||| |||| ||||| || | | || ||| ||||| | Sbjct 2149 CAGCGTGCGACTTGTTGAAGCCGTAGCCGGCAAACTTCTCCATCAGGTCGAACACCTCGT 2090 Query 38492 CGGATGGCAGC-GTCCGAGTAGCCTCGCTCGCTTGCTCCCTTCTGGAAGTTCACGAACTC 38550 ||| | | | | | |||| ||| || || ||||| ||||| | || | Sbjct 2089 CGGCTTTCTCCTGGCTGAGT--CCTTTTTCCGCCGCCCCCTTGCGGAAGATGGCGCGGTG 2032 Query 38551 CTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGAAGGTCGGCCTGACC 38610 || ||||| | |||||| || |||||||||||||| || || || | |||||| || Sbjct 2031 CTCGGCCATCTCCTCGGCTTTTTTCTTGCCCATGGCCCGGCGCAGCATGTCGGCGCCGCC 1972 Query 38611 GAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGAG 38670 ||| |||| ||| | || | ||| || | || | ||||||||||||||||| |||| Sbjct 1971 CAGGCTGTAGCCGCCGAGCAACTGGGCGGTCTGCATCACCTGCTCCTGGTAGACCATGAT 1912 Query 38671 CCCGAAGGTCGGGTCCAGGA---TCTCGGCCAGCGG 38703 |||| ||||| | |||| | |||| ||||||| Sbjct 1911 CCCGTAGGTCTCGGCCAGCACCGACTCGACCAGCGG 1876 Score = 129 bits (142), Expect = 2e-25 Identities = 256/376 (68%), Gaps = 10/376 (3%) Strand=Plus/Minus Query 39381 TGTCCAGCACGCGGGCCGCGTCCTTCATCGCG---TTGCGGGCCTTGATCCTGCCGTACG 39437 |||||| ||| ||| || |||| |||||| ||| |||| || | | || | | Sbjct 1198 TGTCCATCACCCGGCCCACGTCGCGGATCGCGGCCTTGGCGGCCATGGTTC---CGAAGG 1142 Query 39438 TCGCGATCTGTGCGACCTTGTCGCTGCCGTACTTCTCGGTGACGTACCGGATCACGTCGC 39497 | |||||||| || ||| |||||||||| || ||||||| ||||||| | Sbjct 1141 TGGCGATCTGGCTCACGGCGTCCTTGCCGTACTTGTCCTTGACGTAATCGATCACGCGGT 1082 Query 39498 CACGGC--GACGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACGCGCTCAGGGTT 39555 | ||| | | | || || |||||||| | ||| ||||| || || || || ||||| Sbjct 1081 CGCGGTTGGCCTGGCAA--AAATCGATGTCGAAGTCCGGCATCGATACCCGTTCGGGGTT 1024 Query 39556 CAGGAACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGC 39615 |||||| |||||||| | || || | ||||| |||||||||||||| | ||| Sbjct 1023 CAGGAAGCGCTCGAACAGCAGTTTGTATTCCAGCGGGTCGAGGTCGGTGATCCCCATGGC 964 Query 39616 GTACGCGGCCAGCGAGCCAGCCGCAGAGCCACGCCCAGGGCCGACCCACACACCGTTCTC 39675 || || |||||||||| || | || || ||||| || |||||| || || | Sbjct 963 ATAGGCCACCAGCGAGCCGGCGCCGGAACCGCGCCCCGGCCCGACCGGGCAGCCATTGTT 904 Query 39676 CTTCGCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTT 39735 | | ||||| |||||||| |||||| |||||||| || || ||||||| | Sbjct 903 CCTGGCCCACTGTATGAAGTCCCCGACGATCAGGAAGTAGCCCGCAAAGCCCATCTCGAC 844 Query 39736 GATCATGTCGATCTCG 39751 ||| | |||||||| Sbjct 843 GATGGTCCCGATCTCG 828 >seq1656622 Length=840 Score = 109 bits (120), Expect = 2e-19 Identities = 148/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40556 CCCGGCGCGACGTACGCCTCGATCCCGATGATGGGCTTGAC-CCCAGCGGCCTGCCCCTG 40614 ||||| | || ||||||||| | |||||||||||||| || ||| || | || || | Sbjct 21 CCCGGTGTGAGATACGCCTCGGTGCCGATGATGGGCTTCACACCCTGCAGGGTGGCCTTT 80 Query 40615 CGTGAAGAAGTCGTACGCACCGTGCAGGTTGCCGTGGTCGGTCATCGCGAGGGCCTTCAT 40674 | |||| ||| |||| ||| || |||||||||||||| ||||||| |||| |||| Sbjct 81 T-TCCAGAAATCGAACGCGCCGAACATATTGCCGTGGTCGGTGATCGCGATGGCCGTCAT 139 Query 40675 GCCCTGCGCCTTGGCCTCGGCGAACATGTCCTTCAGTCGAGCCGCCCCGTCGAGAAGGCT 40734 ||||||||| || | | || | || || |||||| || |||||||| | Sbjct 140 ACCCTGCGCCCGGGTAGCCGAGATAAGCTCGGCCACTCGAGCGGCACCGTCGAGCATTGA 199 Query 40735 GTACTCGGAGTGGACATGCAGGTG 40758 ||||||| ||| || |||||||| Sbjct 200 ATACTCGGTGTGCACGTGCAGGTG 223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157082169048050