Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_028980.1 Length=62181 Score E Sequences producing significant alignments: (Bits) Value seq1606471 111 6e-20 seq642390 107 7e-19 >seq1606471 Length=311 Score = 111 bits (122), Expect = 6e-20 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 33072 CGCCCGGGCGCTGTGGGACGCGATCATGCGCGGGACCTGGGACTGGGCGGAGCCTGGGGT 33131 |||||| ||||||||| | ||||||| | || | || | || ||||| || | Sbjct 276 CGCCCGCCGGCTGTGGGATGTGATCATGTCCTCCACGTATGATTTTGCCGAGCCCGGCTT 217 Query 33132 GCTGTTCATCGACGCGATCAACCGCATGAACAACCTCTGGTACTGCGAGACCATCGCCGC 33191 | |||| || | |||| ||||||||| ||||| |||||| |||||| ||| Sbjct 216 CATCCTCATTGATAAGGTCAATGAGATGAACAACAACTGGTTCTGCGAAACCATCCGCGC 157 Query 33192 CACCAACCCCTGCGGTGAGCAACCGCTCCCGCCCTACGGTGCCTGCTTGTTGGGCTCCTT 33251 ||||||||| || || ||||| ||||| ||||| || || |||||| || |||| ||| | Sbjct 156 CACCAACCCTTGTGGCGAGCAGCCGCTGCCGCCTTATGGCGCCTGCCTGCTGGGTTCCAT 97 Query 33252 CAACTTGGTCAAGT 33265 ||||||| ||||| Sbjct 96 CAACTTGACCAAGT 83 >seq642390 Length=3645 Score = 107 bits (118), Expect = 7e-19 Identities = 262/386 (68%), Gaps = 16/386 (4%) Strand=Plus/Plus Query 33073 GCCCGGGCGCTGTGGGA-CGCGATCATGCGCGGGACCTGGGACTGGGCGGAGCCTGGGGT 33131 || || ||||||||||| ||| |||||||| | ||| |||| || ||||| || | Sbjct 1278 GCGCGCGCGCTGTGGGAGCGC-ATCATGCGTTCGGCCTACGACTATGCCGAGCCGGGCAT 1336 Query 33132 GCTGTTCATCGACGCGATCAACCGCATGAACAACCTCTGGTACTGCGAGACCATCGCCGC 33191 |||||| | | | |||||| |||||||| ||||||||||||||| | || Sbjct 1337 CCTGTTCCTGGGCCGCATCAACGAGGACAACAACCTGCATTACTGCGAGACCATCACGGC 1396 Query 33192 CACCAACCCCTGCGGTGAGCAACCGCTCCCGCCCTACGGTGCCTGCTTGTTGGGCTCCTT 33251 ||||||||||||||| ||||| || || || |||| || |||| ||||| || | Sbjct 1397 CACCAACCCCTGCGGCGAGCAGCCCCTGCCTGCCTATGGCTGCTGCGACCTGGGCCCCGT 1456 Query 33252 CAACTTG------GTCAAG-TACATCTTCAAGGACGGGGCGG-GCCGCTACGCCTTCGAC 33303 || | || || | || | | || ||||| ||||| || |||||| Sbjct 1457 CATCCTGCCCCGCTTCGTGCGCCACCCTTTTGGCTTTGGCGGTGCCGC--GGCTTTCGAC 1514 Query 33304 TGGGA-CCAGTACCGCGAGGACATCCCGCAGGTGGTCCGCGCGATGGACAACGTGGTTGA 33362 | || | | ||| ||| | | || | ||| || ||| ||||||| ||| | || Sbjct 1515 TTCGAGGCTTTCGCGC-AGGCCGTGGCGTTGCAGGTGCGGGCGCTGGACAATGTGCTCGA 1573 Query 33363 TC-GCGCGATCTACCCGCTGCCGCAGCAGAAGCAGGAAGCCAAGGACAAGCGCCGCATGG 33421 | | | || | ||||||||||||||| |||| |||| || |||||||||||| | Sbjct 1574 CCTGACCTAT-TGGCCGCTGCCGCAGCAGCGCGAGGAGGCCATGGCCAAGCGCCGCATCG 1632 Query 33422 GCCTCGGGATCACCGGCCTGGCCAAC 33447 || | || | |||||||||| |||| Sbjct 1633 GCGTGGGCTTTACCGGCCTGGGCAAC 1658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194938736518282