Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_029005.1 Length=56445 Score E Sequences producing significant alignments: (Bits) Value seq1570345 168 2e-37 seq1291165 125 3e-24 seq1211356 93.3 1e-14 seq1484046 80.6 9e-11 seq694675 80.6 9e-11 seq682472 80.6 9e-11 >seq1570345 Length=246 Score = 168 bits (186), Expect = 2e-37 Identities = 189/248 (76%), Gaps = 5/248 (2%) Strand=Plus/Plus Query 15770 AGTACGTGGAAGAGGTGACCACGGACTTCGGCACGAAGGACGCGGTGACCGCGGACCTGG 15829 |||||||||||||| | ||| ||||||||| ||||||||||||||| | ||||||| Sbjct 1 AGTACGTGGAAGAGTTCGAGACGTCCTTCGGCACCAAGGACGCGGTGACCACCGACCTGG 60 Query 15830 TCGTCCTGTCCGGCC--CGGAGGCCGGTACGGAGTACACCGACGTCATGATCTTCCAGGG 15887 | || ||| | |||| ||| |||| | | | ||||| |||||| |||||||||||||| Sbjct 61 TGGTTCTGAC-GGCCGACGGCGGCCCGGATG-AGTACGACGACGTGATGATCTTCCAGGG 118 Query 15888 GGTCCCTGATCGGCACCCTGAAGCGGAAGATCTCCAGCGGCCGGAAGGTGCTGGGCGTCA 15947 | || |||||| | || ||||| |||| | || |||| ||| |||| ||||||| Sbjct 119 G-TCGCTGATCAGTCAGCTCAAGCGCCGGATCGCGGGCAGCCGCAAGCTGCTCGGCGTCA 177 Query 15948 TCGGGAAGGGCAACGCGAAGAAGGGCCAGAACGCGCCGTACATCCTGGTGGCCCCGGACG 16007 ||| | ||| | ||||||||||| |||||| || ||||||||| | | ||||||| Sbjct 178 TCGCGCTCGGCGAGGCGAAGAAGGGTCAGAACCGCCCCTACATCCTGACGTCGCCGGACG 237 Query 16008 ACGACCAG 16015 | | |||| Sbjct 238 AGGCCCAG 245 >seq1291165 Length=133 Score = 125 bits (138), Expect = 3e-24 Identities = 105/126 (83%), Gaps = 2/126 (2%) Strand=Plus/Minus Query 6440 CATCCGCACGTAAGGCAGTTGCAGTCACACGCGGGCAT-GCAGTCCGACTCCAGGTCGTT 6498 || ||||| || ||||||| |||||||||| || | | ||||||||| ||||||||||| Sbjct 125 CAGCCGCAGGTGAGGCAGTCGCAGTCACAC-CGCCCCTCGCAGTCCGATTCCAGGTCGTT 67 Query 6499 GACGCCAGCAAGGCTGTGCTTCAGCGACGCGCCAGCGACGTCCAGGACCAGGCAGTCCGA 6558 ||| || || |||||||| |||||||| ||||| |||| |||||| ||||||||||| | Sbjct 66 GACCCCGGCGAGGCTGTGGTTCAGCGAGGCGCCCGCGATGTCCAGAACCAGGCAGTCGGT 7 Query 6559 CTTCCC 6564 ||| || Sbjct 6 CTTGCC 1 >seq1211356 Length=125 Score = 93.3 bits (102), Expect = 1e-14 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 6035 GAGCCGTCCACGCGGCCCTGGAAGAACTGGCCGGACGCGTCCGGGTCGGGCAGCATGAAC 6094 || || || |||||||| ||||||||| |||| | | ||||||| ||||||| |||| Sbjct 23 GAACCCTCGACGCGGCCGTGGAAGAACCGGCCCGGGTTGGCCGGGTCCGGCAGCAGGAAC 82 Query 6095 AGGTTCGCATCGTTGCCGACCGGCAGGAAGCGGATGCCCGC 6135 |||||| | || | |||||| | ||||||||||||||| || Sbjct 83 AGGTTCACGTCCTGGCCGACGGTCAGGAAGCGGATGCCGGC 123 >seq1484046 Length=180 Score = 80.6 bits (88), Expect = 9e-11 Identities = 128/181 (71%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 29056 GTGTCCGCCAGGTCGCGCAGATGGTCAGCCGTCTGGCCGATGTTCTGGCTGTAACTCCGG 29115 ||||| | |||||| ||||| ||||| || |||||||| | || || ||| ||||| Sbjct 180 GTGTCGGACAGGTCCCGCAGGTGGTCCGCTGTCTGGCCCACGTCCTTCTCGTACGTCCGG 121 Query 29116 CCGCCCTCCACACCGGCGGTACCGATGACCGTTACGGTGTGCCCGGGGTCGTCCGGCGCC 29175 |||||| || ||||| || |||||| || ||| || ||||||||||| | Sbjct 120 CCGCCCATGACCCCGGCCTCGCCCATGACCACCACATCGTGGCCCGGGTCGTCCGGTTCG 61 Query 29176 AGGCCGTCTTCCACCAGCTGGCGC-GCAATCTCCGTGATGTCCGTGGCCGTGAACGCGAA 29234 ||| |||| || | ||| | ||| || ||| | || | ||| ||| ||| ||| | ||| Sbjct 60 AGGGCGTCCTCGATGAGC-GACGCGGCGATCGCGGTCAAGTCGGTGTCCGCGAAGGTGAA 2 Query 29235 G 29235 | Sbjct 1 G 1 >seq694675 Length=100 Score = 80.6 bits (88), Expect = 9e-11 Identities = 77/99 (78%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 12393 GGCTGCGGAGCTGTGCCGCACCATCTTGGCCATGAACGGTGAGCGCACCGTGTACGGCAC 12452 ||| || ||||||||||| || ||| | ||||||||||| ||||| ||| | |||||||| Sbjct 2 GGCCGCCGAGCTGTGCCGGACGATCCTCGCCATGAACGGCGAGCGGACCATCTACGGCAC 61 Query 12453 GATCATGGACCACACGGTGGACGGCCGCGTTCACCCGTA 12491 | |||||||| ||| | | |||||| ||||| || Sbjct 62 CCTGCTGGACCACCTGGTCGGGGACCGCGTCCACCCCTA 100 >seq682472 Length=100 Score = 80.6 bits (88), Expect = 9e-11 Identities = 64/76 (84%), Gaps = 2/76 (3%) Strand=Plus/Plus Query 8948 AACGACAAAGGGCCGGTCCCCCGTCAAGGAACCGGCCCCG--GGTGCAGCGACAACCGCG 9005 |||| || |||||||||||||| |||||||||||||||| | ||| ||||||||||| Sbjct 5 AACGCGAAGGGGCCGGTCCCCCGACAAGGAACCGGCCCCGGTGTTGCGACGACAACCGCG 64 Query 9006 AAGAAGTCCGCAACCA 9021 |||||| ||| |||| Sbjct 65 AAGAAGCACGCCACCA 80 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 176945260299418