Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_029093.1 Length=75796 Score E Sequences producing significant alignments: (Bits) Value seq652898 300 7e-77 seq636339 105 3e-18 >seq652898 Length=17576 Score = 300 bits (332), Expect = 7e-77 Identities = 523/755 (69%), Gaps = 7/755 (1%) Strand=Plus/Plus Query 65758 CCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGG 65817 |||||||||| | | |||||| ||| |||||| | ||||| || | ||||||| Sbjct 16678 CCACCGGCTCGCTGGGCCTGGACATCGCGCTGGGCGTGGGGGGCCTGCCCCGTGGCCGGG 16737 Query 65818 TGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGG 65877 |||| |||||||| ||||| ||||| || || ||| | || ||| || || | | | | Sbjct 16738 TGGTTGAAATCTATGGCCCGGAATCCTCGGGCAAGACCACGCTGGCGCTGCAGGTGATCG 16797 Query 65878 CCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACC 65937 || | ||| ||| || |||| | ||||| | |||| || ||||| | |||||| Sbjct 16798 CCGAGATGCAAAAGCAGGGCGGCACCTGCGCCTTCGTCGATGCGGAGCATGCGCTGGACG 16857 Query 65938 CTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACA 65997 | ||||| | ||||| ||| | || | |||| || | ||||| |||| Sbjct 16858 TGCAATACGCGCAAAAACTCGGCGTGCAACTGTCCGACCTGCTGATCAGCCAGCCCGACA 16917 Query 65998 CTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCG 66057 | ||||| || || ||||||||||| ||| ||| || || |||| | | | | Sbjct 16918 CCGGCGAACAAGCGCTGGAGATCGTCGACAGCCTGGTGCGCTCCGGCGCGGTCGACCTGA 16977 Query 66058 TCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGG 66117 |||| || ||||| ||||| |||||| ||| ||||| ||||||||||||| || | Sbjct 16978 TCGTGGTGGACTCGGTGGCCGCCCTGACGCCCAAGGCCGAAATCGAAGGCGACATGGGCG 17037 Query 66118 ACAGTCACGTCGG-CCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGC 66176 || | | | ||| |||||| ||||| || ||| ||||| ||||||||||||||| Sbjct 17038 AC-GCCCTGCCGGGCCTGCAAGCGCGGCTGATGAGCCAGGCATTGCGCAAGCTCACCGCG 17096 Query 66177 ACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGC 66236 || ||| | |||||| || ||| |||||||| | ||| |||||||||| Sbjct 17097 ACGATCAAGAAGACCAACTGCATGGTCGTCTTCATCAACCAGATCCGCATGAAGATCGGC 17156 Query 66237 AACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCC 66296 || | | |||| ||| |||||||| |||||||| || | | |||||||||| Sbjct 17157 GTGATGTTCGGCAGCCC---CGAAACCACCACCGGCGGCAATGCGCTCAAGTTCTACGCC 17213 Query 66297 TCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGC 66356 || || ||| |||| |||| |||| || |||| ||| | |||||||| || | ||| Sbjct 17214 TCGGTGCGCCTGGACATCCGCCGCACCGGCACCATCAAGAAGGGCGATGAAGCCATTGGC 17273 Query 66357 AACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAG 66416 ||| ||| ||| ||||| ||||||||||| | ||||||| | | ||||||| Sbjct 17274 AACGAAACCAAGGTCAAGGTGGTCAAGAACAAAGTCAGCCCGCCGTTCAAGACCGCCGAG 17333 Query 66417 TTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGTG 66476 ||| | || ||| || || |||||| || |||| |||| || ||||| ||| |||| Sbjct 17334 TTCGACATCCTGTTTGGCGAAGGCATCAGCCGCGAGGGCGAAATCATCGACATGGGCGTG 17393 Query 66477 -TCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGT 66510 ||| | | ||| | |||||||||||||||| Sbjct 17394 AACGCCAAG-ATCGTGGAAAAGTCGGGCGCCTGGT 17427 >seq636339 Length=1141 Score = 105 bits (116), Expect = 3e-18 Identities = 91/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 66064 TTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTC 66123 ||||||| ||||| ||||||||||| || ||| | |||||||| || ||||| || Sbjct 515 TTGACTCGGTGGCCGCCCTGGTGCCCAAGGCGGAGTTGGAAGGCGAGATGGGGGAAAGCA 456 Query 66124 ACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGC 66176 | | || |||| |||||||||||||||||||| ||||||||||||||||| Sbjct 455 AAATGGGGTTGCAGGCGCGCCTCATGTCGCAGGCGTTGCGCAAGCTCACCGGC 403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 237519289309379