Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq307809 188 6e-43 >seq307809 Length=2175 Score = 188 bits (208), Expect = 6e-43 Identities = 409/598 (68%), Gaps = 22/598 (4%) Strand=Plus/Plus Query 118465 TTCAGTGGCTCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTCA 118524 |||| || ||||||||||||| ||| | |||| ||| || || | || ||||| || Sbjct 654 TTCAACGGTTCAATGTGATTCAGATAAATGTGAGTATCACCCATGTTGTGGATGAACTCT 713 Query 118525 CCAGGTGTAAGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACA 118584 || ||| | || || |||| ||||||||||| |||||||||||| ||||||||| | Sbjct 714 CCTGGTCTTAGTCCAGTCACATGAGCAATCATATATGTCAACAAAGCGTAGCTGGCAATG 773 Query 118585 TTAAAAGGAACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCC 118644 ||||| |||||||| ||||| | ||||| || | ||||||||| |||| ||||| || Sbjct 774 TTAAATGGAACACCGAGACCAACATCTGCCGAGCGCTGGTACAACAGGCACGAGAGTTCT 833 Query 118645 CCGTTTGCAACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCA---TGGAACTC 118701 ||||| |||||||| ||||| | ||| ||||| ||||| ||| ||| | Sbjct 834 CCGTTGGCAACATAGAACTGCACCAGAGCGTGGCATGGTGGCAGCGCCATTTTGGGA--- 890 Query 118702 AGTTGGGCAGGATTCCAGGCTGTTA-AAACATGCCTTCTGCTATATGGTTCTACCTGT-A 118759 || | |||||||| || | || ||| | |||| || ||| | || | | | Sbjct 891 AGATCTTTCGGATTCCACGCACACATAATCAT-TCGTCTGTCATTTGG-TGAACTTTTAA 948 Query 118760 TACCCTCAATTAAATTCTGAATCTGATCCACACCCTTTCCAGTATACTGAGACTCGCAT- 118818 | |||||| | || | | |||||||||||||| |||||||| | | | |||| Sbjct 949 TCTTCTCAATCACATCTTTTAGCTGATCCACACCCTGCCCAGTATAATCATGAT-GCATG 1007 Query 118819 CCTTTATATTCTGCCCCAAAAAATCTCCATTGAAAACCATAAACAGGCCCCAGATCTCCC 118878 |||| || || || || || | ||| ||||||||||| || || || || || || Sbjct 1008 TCTTTGTAATCAGCGCCTGAATGACGCCACTGAAAACCATACACCGGTCCAAGGTCGCCT 1067 Query 118879 TGGGACCT-AAAATC---TAAACCTACTTTTCTC-TGAAATTCTTTTGACCCATTAGCAT 118933 | ||| | ||| |||||| | |||| || | ||| || ||| ||||| || | Sbjct 1068 T----CCTCACGATCGTTTAAACC-AATTTTGTCGAGGAATGCTCGTGAGCCATTGGCGT 1122 Query 118934 TCCAAATAGCAACTCCtttttttGCCAGATCATTAGAGTTTGTAGAACCACTTAAAAACC 118993 ||| || || ||| | |||| || || | ||||| || || | | |||| Sbjct 1123 CCCAGATGTGGACATTTTTCTCAGCCAACTCCTTGGCATTTGTTGATCCTCGAATGAACC 1182 Query 118994 AAAGAAGCTCCTCAACAACGCCTCTCCAAAAAACTGTTTTTGTTGTAAACAGTGGAAA 119051 | | ||||| || ||||||||| |||| || || |||||||| | || ||||| Sbjct 1183 ACAACAGCTCTTCCACAACGCCTTTCCAGAAGACGCGCTTTGTTGTCAGAAGAGGAAA 1240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406093805569228