Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq625167 95.1 3e-14 seq47075 86.0 1e-11 seq451568 84.2 5e-11 >seq625167 Length=369 Score = 95.1 bits (104), Expect = 3e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049 || || ||||| ||||||| ||||||||||| |||||||| |||||||| || ||| Sbjct 280 CGCTGCTGGTCTGGAGGAATTCCTTCCTTGTATAGGATCTTTGCCTTCACGTTCTCAATG 221 Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109 |||||| ||||||| | || |||||||| || || || || ||||| ||||| | | Sbjct 220 GTGTCACTTGGTTCAACCCCAAGGGTGATCGTTTTACCAGTCAGTGTCTTCACAAAAATC 161 Query 211110 TG 211111 || Sbjct 160 TG 159 >seq47075 Length=4692 Score = 86.0 bits (94), Expect = 1e-11 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 || || || ||||||||||| |||||| |||||||| ||||| ||| || ||||| Sbjct 2333 CCCTCTTTATCCTGGATCTTGGCTTTCACATTTTCGATTGTGTCCGAGGGCTCGACCTCT 2274 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTATG 211120 || ||||| ||||| || || || ||||| ||||| | |||||| | ||| Sbjct 2273 AGGGTGATGGTCTTCCCAGTTAGGGTCTTGACAAAAATCTGCATCTAATG 2224 >seq451568 Length=2825 Score = 84.2 bits (92), Expect = 5e-11 Identities = 92/121 (76%), Gaps = 6/121 (5%) Strand=Plus/Minus Query 210997 GGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAG 211056 |||| ||||||| ||||||||||| ||||| || ||||| || || |||||||| Sbjct 2667 GGTCTGGAGGAATGCCTTCCTTGTCTTGGATTTTAGCCTTCACATTCTCAATGGTGTC-- 2610 Query 211057 AGCTT---TCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCA 211113 |||| |||||||| || || || ||||| ||||| || ||||| || || | ||||| Sbjct 2609 -GCTTGGCTCAACCTCAAGGGTAATTGTCTTGCCCGTAAGCGTCTTGACGAAAATCTGCA 2551 Query 211114 T 211114 | Sbjct 2550 T 2550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1134505310723355