Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq307809 190 2e-43 >seq307809 Length=2175 Score = 190 bits (210), Expect = 2e-43 Identities = 412/623 (66%), Gaps = 6/623 (1%) Strand=Plus/Plus Query 29612 GGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAG 29671 ||||| || || |||| | | ||||| | ||| |||||| | ||| | || || Sbjct 621 GGAAATGGCCTTGGCTTGCGTTTTAGCTGCTCCTTCAACGGTTCAATGTGATTCAGATAA 680 Query 29672 ACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCC 29731 | ||||| ||| |||| | |||||| |||||||| ||| ||| || || || ||||| Sbjct 681 ATGTGAGTATCACCCATGTTGTGGATGAACTCTCCTGGTCTTAGTCCAGTCACATGAGCA 740 Query 29732 ATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCC 29791 ||||| || || | | || ||||||||| |||||||| || || ||||| || | || Sbjct 741 ATCATATATGTCAACAAAGCGTAGCTGGCAATGTTAAATGGAACACCGAGACCAACATCT 800 Query 29792 CCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACATG 29851 | || | |||||| | | |||||||||| ||||||| | || || ||||| || Sbjct 801 GCCGAGCGCTGGTACAACAGGCACGAGAGTTCTCCGTTGGCAACATAGAACTGCACCAGA 860 Query 29852 GCATGGCACGGAGGAAGGGCCAT---GAGACCCAAGTCTTTGGGGTTCCAGGCACACACG 29908 || ||||| || || || ||||| | || | ||||| || ||||| ||||||| Sbjct 861 GCGTGGCATGGTGGCAGCGCCATTTTGGGA---AGATCTTTCGGATTCCACGCACACATA 917 Query 29909 ATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCC 29968 || || || ||||| | ||| | | || || | | | || ||||||||| Sbjct 918 ATCATTCGTCTGTCATTTGGTGAACTTTTAATCTTCTCAATCACATCTTTTAGCTGATCC 977 Query 29969 ACCCCCATCCCCGAGTAGTCTGNNNNNNNNNNNNNNNNNNNNNNNNCGAAATGCCTCCAC 30028 || ||| ||| | || || | |||| | |||| Sbjct 978 ACACCCTGCCCAGTATAATCATGATGCATGTCTTTGTAATCAGCGCCTGAATGACGCCAC 1037 Query 30029 TGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCC 30088 || || || ||||||||||| ||||| || || || | | | || || | ||||| Sbjct 1038 TGAAAACCATACACCGGTCCAAGGTCGCCTTCCTCACGATCGTTTAAACCAATTTTGTCG 1097 Query 30089 AAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTG 30148 | || ||| || || |||||||||||||| | || ||||| | | ||| ||| Sbjct 1098 AGGAATGCTCGTGAGCCATTGGCGTCCCAGATGTGGACATTTTTCTCAGCCAACTCCTTG 1157 Query 30149 GAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACC 30208 | ||||| || |||| | |||||||| |||||| ||||| ||| | ||||| ||||| Sbjct 1158 GCATTTGTTGATCCTCGAATGAACCACAACAGCTCTTCCACAACGCCTTTCCAGAAGACG 1217 Query 30209 CTCTTGGTCGTGAGGAGGGGAAA 30231 | ||| || || || || ||||| Sbjct 1218 CGCTTTGTTGTCAGAAGAGGAAA 1240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397948352163922