Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_030696.1 Length=93139 Score E Sequences producing significant alignments: (Bits) Value seq657484 129 3e-25 >seq657484 Length=4216 Score = 129 bits (142), Expect = 3e-25 Identities = 231/330 (70%), Gaps = 8/330 (2%) Strand=Plus/Plus Query 71950 ATCACCGTGATCGGAAATCTGACCGCCGATCCCGAACTGCGCTTCACCCCCTCGGGCGCG 72009 || ||||| | || || || || || ||||| |||||||||| ||||| || | Sbjct 2920 ATTACCGTCGTGGGTAACCTCACGGCTGATCCAGAACTGCGCTACACCCAGAACGGGTTG 2979 Query 72010 CCGGTCGCCAACTTCACCGTCGCAAGCACCCCGCGGTACTTCGACAAGCAGTCCAACGAG 72069 ||||||| |||||||| | || ||||| || |||||||| ||| ||| ||| Sbjct 2980 GCGGTCGCAAACTTCACGATTGCCTCTACCCCCCGCAACTTCGACCGTCAGACCAGTGAG 3039 Query 72070 TGGAAGGACGCCGAGGCGCTCTTCCTGCGCTGCAACAT-CTGGCGCGAGCCGGCCGAGAA 72128 |||||||||| |||| | || ||||| || || | | |||||| ||| ||||| | Sbjct 3040 TGGAAGGACGGCGAGCCCCTGTTCCTTCG-AGCGAGTTGCTGGCGTGAGTTTGCCGATCA 3098 Query 72129 CGTCACCGAG-TCGCTGTCCAAGGGCATGCGCGTCAT--CGTCCAGGGTCGCCTCAAGCA 72185 ||| |||| ||| || || || |||||||| || || || || || || Sbjct 3099 CGT-TGCGAGCTCGTTGACCCGCGGGTCACGCGTCATTGCGACC--GGACGGCTGCGTCA 3155 Query 72186 GCGCAGCTACGAGACGAAGGAAGGCGAGAACCGGACGGTCATCGAGCTCGAGGTCGAGGA 72245 ||| ||||||||||| || ||||| || || || ||||| |||||| |||| || Sbjct 3156 GCGTCAATACGAGACGAAAGAGGGCGAAAAGCGCACCTCGATCGAACTCGAGATCGACGA 3215 Query 72246 GATCGGCCCCGCACTGCGGTACGCCACCGC 72275 ||||||||| |||||||||||||| || Sbjct 3216 AATCGGCCCCAGCCTGCGGTACGCCACGGC 3245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 291894423415700