Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq307809 235 4e-57 >seq307809 Length=2175 Score = 235 bits (260), Expect = 4e-57 Identities = 424/620 (68%), Gaps = 0/620 (0%) Strand=Plus/Plus Query 27106 GGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAG 27165 ||||| || || |||| | | ||||| ||||| |||||| | ||||| ||| || Sbjct 621 GGAAATGGCCTTGGCTTGCGTTTTAGCTGCTCCTTCAACGGTTCAATGTGATTCAGATAA 680 Query 27166 ACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCC 27225 | ||||| || |||| | |||||| |||||||| ||| ||| || || || ||||| Sbjct 681 ATGTGAGTATCACCCATGTTGTGGATGAACTCTCCTGGTCTTAGTCCAGTCACATGAGCA 740 Query 27226 ATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCC 27285 ||||| || || | | || ||||||||| |||||||| || || ||||| || | || Sbjct 741 ATCATATATGTCAACAAAGCGTAGCTGGCAATGTTAAATGGAACACCGAGACCAACATCT 800 Query 27286 CCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTACGTAAAACTGACATATG 27345 |||| | |||||| | | | |||||||| ||||| | | || || ||||| | Sbjct 801 GCCGAGCGCTGGTACAACAGGCACGAGAGTTCTCCGTTGGCAACATAGAACTGCACCAGA 860 Query 27346 GCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATG 27405 |||||||| || || || ||||| | | ||||| || ||||| || |||| || Sbjct 861 GCGTGGCATGGTGGCAGCGCCATTTTGGGAAGATCTTTCGGATTCCACGCACACATAATC 920 Query 27406 ATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACC 27465 || || ||||| | ||| | | || || | | | || ||||||||||| Sbjct 921 ATTCGTCTGTCATTTGGTGAACTTTTAATCTTCTCAATCACATCTTTTAGCTGATCCACA 980 Query 27466 CCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGG 27525 ||| ||| | || || |||||| |||| || || || |||| | ||| || Sbjct 981 CCCTGCCCAGTATAATCATGATGCATGTCTTTGTAATCAGCGCCTGAATGACGCCACTGA 1040 Query 27526 AACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAA 27585 || || ||||||||||| ||||| || || || | | | || || | ||||| | Sbjct 1041 AAACCATACACCGGTCCAAGGTCGCCTTCCTCACGATCGTTTAAACCAATTTTGTCGAGG 1100 Query 27586 AAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAG 27645 || ||| || || |||||||||||||| | || ||||| | | ||| |||| Sbjct 1101 AATGCTCGTGAGCCATTGGCGTCCCAGATGTGGACATTTTTCTCAGCCAACTCCTTGGCA 1160 Query 27646 TTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTC 27705 ||||| || |||| | |||||||| |||||| ||||| ||| | ||||| ||||| | | Sbjct 1161 TTTGTTGATCCTCGAATGAACCACAACAGCTCTTCCACAACGCCTTTCCAGAAGACGCGC 1220 Query 27706 TTGGTCGTGAGGAGGGGAAA 27725 || || || || || ||||| Sbjct 1221 TTTGTTGTCAGAAGAGGAAA 1240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362033737553537