Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_030909.1 Length=50183 Score E Sequences producing significant alignments: (Bits) Value seq515650 143 8e-30 seq1098788 109 2e-19 seq693902 84.2 7e-12 >seq515650 Length=11028 Score = 143 bits (158), Expect = 8e-30 Identities = 167/223 (75%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 33987 GCCGTTGCGGTGCTTCGCGATGATCAACTCAGCCACGCCGCGGTACTGGGTGTCCGGGTG 34046 ||| ||||| ||||| ||||||| | || |||||| | | || | | || || Sbjct 9065 GCCATTGCGCTGCTTGCCGATGATGATTTCGGCCACGTTCGGCTCCTTGCTCTCTTTGTT 9006 Query 34047 ATAGACCTCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCCGGA 34106 ||| ||||| ||||| | ||||||||| | |||||| || |||||||| || ||||| Sbjct 9005 GTAGTAGTCGTCGCGGTAGATGAACATGATGATGTCGGCATCTTGCTCGATGGCGCCGGA 8946 Query 34107 CTCGCGCAGGTCCGACATCATCGGTCGCTTGTTCGGCCGCTGCTCCAGGGAGCGGTTGAG 34166 |||||||||||| ||||||| ||| || |||| | |||||||| | ||||| ||||| Sbjct 8945 CTCGCGCAGGTCGGACATCAGCGGGCGTTTGTCGGTGCGCTGCTCGACCGAGCGATTGAG 8886 Query 34167 CTGCGACAGCACGATCA-CGGGGATACCAAGCTCCATGGCCAG 34208 |||||| ||| | |||| |||| || | || ||| ||||||| Sbjct 8885 CTGCGAGAGCGCCATCACCGGGCATTGC-AGTTCCTTGGCCAG 8844 >seq1098788 Length=117 Score = 109 bits (120), Expect = 2e-19 Identities = 92/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 11155 GACGAAAAGGGTATGCAGAATGTGCACACCCCTGGCGGCGATCAGGAAATGCTGGTCATC 11214 |||||| |||||| ||| | ||||| |||| | |||| |||||| | ||||| ||||| Sbjct 117 GACGAACAGGGTACGCACATTGTGCGTACCCTTCGCGGTGATCAGAACATGCTCATCATC 58 Query 11215 AACGAGTCAGGGCTGTACTCGGCGATCCTGCGCAGCCGCAAGGCCGAGGCCAA 11267 |||||||| || || ||||| || |||||||||||||| || |||||||||| Sbjct 57 AACGAGTCCGGCCTCTACTCCGCCATCCTGCGCAGCCGGAAACCCGAGGCCAA 5 >seq693902 Length=100 Score = 84.2 bits (92), Expect = 7e-12 Identities = 73/88 (83%), Gaps = 2/88 (2%) Strand=Plus/Plus Query 34102 CCGGACTCGCGCAGGTCCGACATCATCGGTCGCTTGTTCGGC-CGCTGCTCCAGGGAGCG 34160 ||||| || ||||| ||||| | | ||| ||||||| |||| ||||| ||||| ||||| Sbjct 3 CCGGATTCACGCAGATCCGAGTTGACCGGCCGCTTGT-CGGCGCGCTGTTCCAGCGAGCG 61 Query 34161 GTTGAGCTGCGACAGCACGATCACGGGG 34188 ||||||||||||||| ||||||| ||| Sbjct 62 GTTGAGCTGCGACAGGGCGATCACCGGG 89 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157301754706230