Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_030911.1 Length=45858 Score E Sequences producing significant alignments: (Bits) Value seq657484 143 8e-30 >seq657484 Length=4216 Score = 143 bits (158), Expect = 8e-30 Identities = 247/352 (70%), Gaps = 5/352 (1%) Strand=Plus/Plus Query 36170 CATGGCAGGCGAAACCATCATCACGGTAATCGGCAACCTGACAGCCGATCCGGAACTGCG 36229 |||||| |||||||| | ||| || || | || ||||| || || ||||| |||||||| Sbjct 2901 CATGGCTGGCGAAACGACCATTACCGTCGTGGGTAACCTCACGGCTGATCCAGAACTGCG 2960 Query 36230 GTTCACTCCGTCCGGCGCGGCGGTCGCGAACTTCACGGTCGCTTCGACTCCGCGACAGTT 36289 | ||| | | ||| ||||||||| ||||||||| | || || || || || | || Sbjct 2961 CTACACCCAGAACGGGTTGGCGGTCGCAAACTTCACGATTGCCTCTACCCCCCGCAACTT 3020 Query 36290 CGACCGGGACGCGAACGAGTGGAAGGACGGCGATCCGCTGTTCATGCGCTGCAACCTG-T 36348 |||||| | | | ||||||||||||||||| || |||||| | || || | || | Sbjct 3021 CGACCGTCAGACCAGTGAGTGGAAGGACGGCGAGCCCCTGTTCCTTCG-AGCGAGTTGCT 3079 Query 36349 GGCGTGACGCGGCGGAGAACGTCACGGACTCGCTGTCGAAGGGGACTCGGGTCATCGTGC 36408 ||||||| || || |||| || |||| || | ||| | || ||||| | | Sbjct 3080 GGCGTGAGTTTGCCGATCACGTTGCGAGCTCGTTGACCCGCGGGTCACGCGTCATTGCGA 3139 Query 36409 AGGGCCGGCTGAAACAGCGGAGCTACGAGGACAAAGAGGGCGTCACGCGGACCATCG-TC 36467 || |||||| ||||| |||||| |||||||||| | ||| ||| ||| || Sbjct 3140 CCGGACGGCTGCGTCAGCGTCAATACGAGACGAAAGAGGGCGAAAAGCGCACC-TCGATC 3198 Query 36468 GAGCTGGAAGTGGACGAGATCGGTCCGTCCCTGAAGTACGCGACGGCGAACG 36519 || || || | ||||| ||||| || |||| |||||| ||||| |||| Sbjct 3199 GAACTCGAGATCGACGAAATCGGCCCCAGCCTGCGGTACGCCACGGC-AACG 3249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143734497968680