Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_030917.1 Length=93577 Score E Sequences producing significant alignments: (Bits) Value seq296729 479 2e-130 seq657484 104 1e-17 seq487186 82.4 4e-11 >seq296729 Length=6982 Score = 479 bits (530), Expect = 2e-130 Identities = 651/900 (72%), Gaps = 6/900 (1%) Strand=Plus/Minus Query 78263 GTGTGGGATCGACTCACCGGCAACTTCTGGTTGCCCGAGAAGGTACCGGTGTCCAACGAC 78322 |||||| | || ||| |||||||| ||||||||||| || ||||| | || |||||| Sbjct 3357 GTGTGGAACCGTCTCGTTGGCAACTTTTGGTTGCCCGAAAAAGTACCCCTCTCTAACGAC 3298 Query 78323 ATCCCATCCTGGGACACCCTTACGCCGGAAGAGAAGGAACTCACTATGCGTGTGTTCACC 78382 | | ||| ||| |||| || | | |||| || ||||| ||||| || |||||| Sbjct 3297 GTGCAATCGTGGAACACACTGAGCTCTCAAGAACAGATGCTCACGATGCGGGTATTCACC 3238 Query 78383 GGCCTCACCCTGCTCGACACCATCCAGGGCACAGTTGGCGCCATCTCGCTCATCGCCGAC 78442 || || || ||||||| ||||| || || || || || || |||| |||||| |||| Sbjct 3237 GGGCTGACATTGCTCGATACCATTCAAGGAACGGTGGGGGCGGTCTCACTCATCCCCGAT 3178 Query 78443 GCCAACACCCCGCACGAGGAGGCGGTGCTCACCAACATCGCGTTCATGGAGTCGGTACAC 78502 || || |||||||| || |||||| || ||||| | || ||||| ||||| ||| Sbjct 3177 GCTCTTACGCCGCACGAAGAAGCGGTGTATACAAACATTTCTTTTATGGAATCGGTTCAC 3118 Query 78503 GCCAAGTCCTACAGCTCGATCTTCTCAACGCTATGCTCCTCCAAGC-AGATTGACGAGGC 78561 || ||| ||| ||||||||| || || || || ||| | | || | |||||||| || Sbjct 3117 GCAAAGAGTTACTCCTCGATCTTTTCGACCCTGTGTTCCAC-ACGCGAAATTGACGATGC 3059 Query 78562 GTTCCGTTGGTCGGAGGAGAACGAGTACCTGCAGCGCAAGGCCCAGATCGTCCTGGACTA 78621 ||||| ||||||| ||| ||||| || |||| || || |||||| |||| || Sbjct 3058 CTTCCGATGGTCGGTGGAAAACGAAAACTTGCAAAAAAAAGCTTCCATCGTCATGGAGTA 2999 Query 78622 CTACCGCGGCGACGACCCCTTGAAGCGGAAGGTGGCCAGTACGCTCCTGGAGGGCTTCCT 78681 |||||| || || || || | || || ||||| ||| ||| | || ||| ||||| Sbjct 2998 CTACCGAGGGGATGAGCCACTCAAACGTAAGGTTGCCTCAACGTTGCTTGAGTCATTCCT 2939 Query 78682 CTTCTACTCGGGCTTCTACCTGCCGATGTACTGGTCGAGCCGCGCCAAGCTGACGAACAC 78741 ||||||||| || || ||||| |||||||| |||||||||||||| || || || ||||| Sbjct 2938 CTTCTACTCAGGATTTTACCTCCCGATGTATTGGTCGAGCCGCGCAAAACTCACCAACAC 2879 Query 78742 CGCGGACGTGATCCGGTTGATTATCCGAGACGAAGCAGTTCATGGGTACTACATCGGATA 78801 ||| || | || || | || || || || ||||| || || || ||||||||||| || Sbjct 2878 CGCCGATCTTATTCGACTCATCATTCGGGATGAAGCTGTGCACGGTTACTACATCGGCTA 2819 Query 78802 CAAGTACCAGCGAGGCCTCGAGACCCAGGGGCCGGCGCGGCAGGCTGAGCTCAAGGAGTA 78861 |||||||||||| || | || | || | ||| || | |||||||| || || Sbjct 2818 CAAGTACCAGCGTGGTTTGGAAATGGTGGATGCCGCGAAGCGTGAAGAGCTCAAAGATTA 2759 Query 78862 CACGTTCGATCTGCTCTCGGAGCTCTACGACAACG-AGTGTGACTACACCGAGCAGCTCT 78920 ||| || || |||| || |||||||| || | |||| | || || || | || | Sbjct 2758 CACTTTTTCACTCCTCTACGAACTCTACGAGAATGAAGTG-CAATATACACAGGATCTTT 2700 Query 78921 ATGACGACGTCGGACTCACCGAGGATGTCAAGAAGTTCCTGCGCTACAACGGCAACAAGG 78980 ||||||| |||||||| ||||| || |||||||| || ||| |||||| | |||||| | Sbjct 2699 ATGACGAAGTCGGACTTACCGAAGACGTCAAGAAATTTTTGCACTACAATGCCAACAAAG 2640 Query 78981 CGCTGATGAACCTCGGCTACGAAGCACTGTTCCCCAAGGAAGAGACC-ATGGCAGACCCG 79039 |||| |||||||| || || || || ||||||| ||| | ||| ||| || ||| Sbjct 2639 CGCTCATGAACCTGGGATATGAGGCGATGTTCCCGAAGTCGGTTACCGATGTAAG-CCCA 2581 Query 79040 GCCATCATGTCCGCGCTCTCACCAGGCGGCGACGAGAACCACGACTTCTTCTCCGGGTCG 79099 || || | || || | || || || |||||||||||| ||||||||||| || || Sbjct 2580 GCGATTCTCTCGGCCTTGTCTCCCAACGCCGACGAGAACCATGACTTCTTCTCTGGTTCC 2521 Query 79100 GGCTCGAGCTACGTCATCGGCAAAGCTGAAGCCACGGCAGATGAGGACTGGGACTTCTGA 79159 ||||| ||||| || ||||| || || | || | ||||| ||||||||||||||| Sbjct 2520 GGCTCTAGCTATGTGATCGGTAAGGCGGTCAATACTGAGGATGACGACTGGGACTTCTGA 2461 >seq657484 Length=4216 Score = 104 bits (114), Expect = 1e-17 Identities = 234/342 (68%), Gaps = 15/342 (4%) Strand=Plus/Plus Query 69641 CATCACCGTCATCGGTAACCTGACCGCCGACCCCGAACTCCGGTTCACGCCCTCCGGTGC 69700 ||| |||||| | |||||||| || || || || ||||| || | ||| | ||| Sbjct 2919 CATTACCGTCGTGGGTAACCTCACGGCTGATCCAGAACTGCGCTACACCCAGAACGGGTT 2978 Query 69701 CGCGGTCGCGAACTTCACCGTCGCGTCGACCCCGCGGTACTTCGACAAGCAGTCGAACGA 69760 |||||||| |||||||| | || || ||||| || |||||||| ||| | | || Sbjct 2979 GGCGGTCGCAAACTTCACGATTGCCTCTACCCCCCGCAACTTCGACCGTCAGACCAGTGA 3038 Query 69761 GTGGAAGGATGCCGAGGCACTCTTCCTGCGCTGCAACGT-CTGGCGCGAGTACGCCGAGA 69819 ||||||||| | |||| | || ||||| || || | | |||||| |||| ||||| Sbjct 3039 GTGGAAGGACGGCGAGCCCCTGTTCCTTCG-AGCGAGTTGCTGGCGTGAGTTTGCCGATC 3097 Query 69820 ACGTGACTGAG-TCGCT--CCAGAAGGGCGCCCGCGTCAT--CGTCCAGGGCAAGCTCAA 69874 |||| | ||| ||| | || | || | |||||||| || || || ||| Sbjct 3098 ACGTTGC-GAGCTCGTTGACCCG--CGGGTCACGCGTCATTGCGACC--GGACGGCTGCG 3152 Query 69875 GCAGCGGTCCTACGA---GAAGGATGGCCAGCCGCGCACCACCTTCGAGCTCGAGGTTGA 69931 ||||| ||||| ||| || ||| | ||||||| | |||| |||||| | || Sbjct 3153 TCAGCGTCAATACGAGACGAAAGAGGGCGAAAAGCGCACCTCGATCGAACTCGAGATCGA 3212 Query 69932 GGAGATCGGCCCCGCACTCCGGTACGCCACCGCCCGGGTCAC 69973 || ||||||||| || ||||||||||| || |||||| Sbjct 3213 CGAAATCGGCCCCAGCCTGCGGTACGCCACGGCAACGGTCAC 3254 >seq487186 Length=932 Score = 82.4 bits (90), Expect = 4e-11 Identities = 62/69 (90%), Gaps = 3/69 (4%) Strand=Plus/Plus Query 4263 GGGCG-TAGCTCAATTGGAAGAGCAGCGGTCTCCAAAACCGCCGG-TGTAGGTTCGAGTC 4320 ||||| | |||||||||| ||||||||||||||||||||||| || || ||||||||||| Sbjct 47 GGGCGGTGGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCGAGTC 106 Query 4321 CTG-CCGCC 4328 ||| ||||| Sbjct 107 CTGTCCGCC 115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 293267675375486