Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_031010.1 Length=246390 Score E Sequences producing significant alignments: (Bits) Value seq529136 120 5e-22 seq1638728 104 4e-17 seq655988 104 4e-17 seq521754 91.5 2e-13 >seq529136 Length=3526 Score = 120 bits (132), Expect = 5e-22 Identities = 150/205 (73%), Gaps = 3/205 (1%) Strand=Plus/Plus Query 202549 GACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGACCTGACC 202608 || || || || ||||| |||||||| | || || ||| |||| || | || Sbjct 125 GATCGAACGGGAACCGGAACGCGCTCTCTTTTTGGAAGACAGTTGCGTTTCAATTTGCAA 184 Query 202609 GAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCACGAGCTG 202668 ||||| || || || ||||||| ||||| | || || || || ||||| || ||| || Sbjct 185 GAAGGGTTTCCTTTGATGACCACAAAAAAACTGCATCTGCGCTCGATCATACATGAGTTG 244 Query 202669 CTGTGGTTCCTGAAAGGGGACACCAACATCAGTTACCTGAACGATAACGGGGTCACTATC 202728 |||||||| |||||||||||||||| || | || | || || ||||| || ||||| Sbjct 245 CTGTGGTTTTTGAAAGGGGACACCAATATTAAATATTTAAAAGACAACGGCGTTTCTATC 304 Query 202729 TGGGACGAATGGGCGCGGGATGAAA 202753 |||||||||||||| |||||||| Sbjct 305 TGGGACGAATGGGC---GGATGAAA 326 >seq1638728 Length=450 Score = 104 bits (114), Expect = 4e-17 Identities = 192/282 (68%), Gaps = 0/282 (0%) Strand=Plus/Plus Query 203290 CTATCGTGTCAGTTGTATCAGCGCAGCGCCGATGTCTTCTTAGGCGTGCCGTTTAACATC 203349 || ||||| ||| | |||||||||||||||||| | ||| | || |||||||| || || Sbjct 30 CTCTCGTGCCAGCTCTATCAGCGCAGCGCCGATCTGTTCCTCGGGGTGCCGTTCAATATT 89 Query 203350 GCCTCGTATGCTTTACTGACTGAGATGGTTGCTCAGCAGGTCAACATGGTGGCCGAGGAG 203409 | || || || || || || | ||| | || || ||| | || | | | | || Sbjct 90 CCGTCCTACGCGTTGCTCACCCACATGATCGCGCAACAGACCGACCTCGCCGTTGGCGAC 149 Query 203410 TTCGTCTGGACAGGCGGTGATACACATCTGTATTCCAACCATCTGGAGCAGGCCCGTCTG 203469 |||| ||||| |||||||| ||| | || ||| || || || |||| ||| Sbjct 150 CTCGTGTGGACCGGCGGTGACTGCCATGTTTACGACAATCACCTCGAACAGGTTGACCTG 209 Query 203470 CAGTTAACTCGTGACCCGCACCCATTACCGCGTCTGAAATTCAAACGTAAGCCCGAGTCT 203529 || || | |||||| ||| ||| | || | ||| | || || || || | ||| Sbjct 210 CAATTGAGTCGTGAACCGTTCCCCGTGCCCAGGCTGCACATCGTGCGGAAACCGGCCTCT 269 Query 203530 ATCTTCGACTACCAGTTCGAAGACTTTGAAATCGAAGGCTAC 203571 |||||||| ||| |||| |||||||| | ||||| || ||| Sbjct 270 ATCTTCGATTACGAGTTTGAAGACTTCGTGATCGAGGGATAC 311 >seq655988 Length=4118 Score = 104 bits (114), Expect = 4e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 202549 GACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGACCTGACC 202608 ||||| |||||||||||||| | ||||||| ||||||||| ||||| ||| | Sbjct 3147 GACCGCACCGGCACCGGCACCAAAAGCCTGTTCGGCCACCAGATGCGCTTTGATCTGCGC 3088 Query 202609 GAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCACGAGCTG 202668 | ||||| || ||||| |||||||| || || |||||| || ||||| | || ||| Sbjct 3087 GGGGGCTTTCCGCTGGTCACCACGAAGAAAGTGCACCTCAAATCCATCATCGAAGAACTG 3028 Query 202669 CTGTGGTTCCTGAAAGGGGACACCAACATCAGTTACCTGAACGATAACGGGGTCACTATC 202728 ||||||||||| || ||||| | | | ||| | | ||| |||| || Sbjct 3027 CTGTGGTTCCTCGCCGGCTCGGGCAACAACCGCTGGCTGCAGCAGCGCGGTGTCAGCATT 2968 Query 202729 TGGGACGAATGGGCGCG 202745 ||||||||||||||||| Sbjct 2967 TGGGACGAATGGGCGCG 2951 >seq521754 Length=2664 Score = 91.5 bits (100), Expect = 2e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 2709 CTGTAGCTCAGACGGTTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAAACCC 2768 ||||||| ||| ||||||| | ||||||||||||||||||||||||||||||||| ||| Sbjct 1872 CTGTAGCGCAGTCGGTTAGCGCGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAGTCCC 1931 Query 2769 GTCAG 2773 ||||| Sbjct 1932 GTCAG 1936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 771967020942000