Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_031029.1 Length=93686 Score E Sequences producing significant alignments: (Bits) Value seq657484 138 7e-28 >seq657484 Length=4216 Score = 138 bits (152), Expect = 7e-28 Identities = 235/331 (71%), Gaps = 10/331 (3%) Strand=Plus/Plus Query 72629 ATCACCGTGATCGGAAACCTGACCGCCGATCCCGAACTGCGCTTCACCCCCT-CGGGTGC 72687 || ||||| | || ||||| || || ||||| |||||||||| ||||| ||||| Sbjct 2920 ATTACCGTCGTGGGTAACCTCACGGCTGATCCAGAACTGCGCTACACCCAGAACGGGTTG 2979 Query 72688 GCCGGTCGCCAACTTCACCGTCGCAAGCACCCCGCGGTACTTCGACAAGCAGTCCAACGA 72747 || |||||| |||||||| | || ||||| || |||||||| ||| ||| || Sbjct 2980 GC-GGTCGCAAACTTCACGATTGCCTCTACCCCCCGCAACTTCGACCGTCAGACCAGTGA 3038 Query 72748 GTGGAAGGACGCCGAGGCGCTCTTCCTGCGCTGCAACAT-CTGGCGCGAGCCGGCCGAGA 72806 ||||||||||| |||| | || ||||| || || | | |||||| ||| ||||| Sbjct 3039 GTGGAAGGACGGCGAGCCCCTGTTCCTTCG-AGCGAGTTGCTGGCGTGAGTTTGCCGATC 3097 Query 72807 ACGTCACCGAG-TCGCTGTCCAAGGGCATGCGCGTCAT--CGTCCAGGGTCGCCTCAAGC 72863 |||| |||| ||| || || || |||||||| || || || || || | Sbjct 3098 ACGT-TGCGAGCTCGTTGACCCGCGGGTCACGCGTCATTGCGACC--GGACGGCTGCGTC 3154 Query 72864 AGCGCAGCTACGAGACGAAGGAAGGCGAGAACCGGACGGTCATCGAGCTCGAGGTCGAGG 72923 |||| ||||||||||| || ||||| || || || ||||| |||||| |||| | Sbjct 3155 AGCGTCAATACGAGACGAAAGAGGGCGAAAAGCGCACCTCGATCGAACTCGAGATCGACG 3214 Query 72924 AGATCGGCCCCGCGCTGCGGTACGCCACCGC 72954 | ||||||||| |||||||||||||| || Sbjct 3215 AAATCGGCCCCAGCCTGCGGTACGCCACGGC 3245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 293609420726209