Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq533080 123 3e-23 seq418291 96.9 5e-15 seq360635 96.9 5e-15 >seq533080 Length=1015 Score = 123 bits (136), Expect = 3e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 76518 GTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATG 76577 ||||||||||||| |||||||| | | | || ||||| |||| |||||||||| || Sbjct 558 GTTCAAATTCATCACCCCAAACTTTGTGAAGGCCTGGACACTCATGAGGACACATCAGTG 617 Query 76578 ACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAA 76637 ||| ||||||| || || || ||||| || | ||| || |||||||| ||| | Sbjct 618 TCCAGTCACCATTGCTCTCGACTCGCTTCATGAATAAATCTGGAATCCATAGTGCATAGA 677 Query 76638 ATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCA 76697 |||| ||||| | || | ||||| || |||||||| || | ||| || || || | Sbjct 678 ATAGGTCTCGTGCTCGCTGCTCTTCCTTGCCTGTATTTTTCCGACAATCCAGAAAGTCAA 737 Query 76698 TAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTC 76745 || || | |||||||||||| || || || || | | |||| |||| Sbjct 738 AGATGTCGGCATGCCATGGTTCCAGGTAAATGGCAAAAGCACCAGGTC 785 >seq418291 Length=2843 Score = 96.9 bits (106), Expect = 5e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 75444 TCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATAT 75503 |||| | ||||||||||||||| | ||||||| ||| | || || || || ||||| | Sbjct 1704 TCCAACAGTAGAAATGCATGCTGCTCAGTTTGGCATAGTTTGGTTCTGCAATGTGAATGT 1763 Query 75504 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 75563 | | |||||||| || || ||||| | || | |||||| ||||| || ||||| |||| Sbjct 1764 TGAGGGACTGACTCTGGTCAATGAACGGACCACGATCAGCAGCCATCTTGATAATAGTCT 1823 Query 75564 TTTGAGGAATTTCCCAAATAGTTTTG 75589 | || | || ||||| | |||||| Sbjct 1824 TCTGGGAGATCTCCCAGACGGTTTTG 1849 >seq360635 Length=7270 Score = 96.9 bits (106), Expect = 5e-15 Identities = 92/118 (78%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 75726 ATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCAT 75785 ||||||| ||||| || | || ||| || || |||||||| || || || | | |||| Sbjct 612 ATTCTCCTGACAACACCCGTCTAGTATAGATGTTACTGGTGTAAGGCTCAAAACTTTCAC 553 Query 75786 TGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATT 75843 |||||||||||| ||||||||||| ||||| ||||| || | ||||| | |||||| Sbjct 552 AGTTTCCCAAAATCTGAGCAGTTGATGCAGTTGGCATCGGAGACACCAGCAGACTATT 495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 698145226424640