Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq655988 201 7e-47 seq1638728 150 1e-31 seq611210 86.0 4e-12 >seq655988 Length=4118 Score = 201 bits (222), Expect = 7e-47 Identities = 520/778 (67%), Gaps = 56/778 (7%) Strand=Plus/Minus Query 836 GATCGCACCGGCACCGGCACGCTGAGCAAGTTCGGCGCCCAGCTGCGGTACGACCTCACC 895 || ||||||||||||||||| ||| ||||||| |||| |||| | || || | Sbjct 3147 GACCGCACCGGCACCGGCACCAAAAGCCTGTTCGGCCACCAGATGCGCTTTGATCTGCGC 3088 Query 896 GAGGGCTTCCCGCTGGTCACCACGAAGCGCGTCCACTTCAAATCGGTTGCGTACGAACTT 955 | |||||| |||||||||||||||||| || ||| ||||||| | | ||||| Sbjct 3087 GGGGGCTTTCCGCTGGTCACCACGAAGAAAGTGCACCTCAAATCCATCATCGAAGAACTG 3028 Query 956 CTGTGGTTCCTCAGTGGC---GACACGAACGTGAAGGC-GCT-CAACGACAACGGCGTCA 1010 |||||||||||| ||| | || ||| | ||| || || || ||| |||| Sbjct 3027 CTGTGGTTCCTCGCCGGCTCGGGCAACAACC-GCTGGCTGCAGCAGCG----CGGTGTCA 2973 Query 1011 CCATCTGGGACGAGTGGGCCGACGCCGGCGGAAACCTCGGTCCTGTCTACGGCGCGCAGT 1070 ||| |||||||| ||||| ||| | ||| | || || || || ||||||| ||| | Sbjct 2972 GCATTTGGGACGAATGGGCGCGCGCAGACGGCGATCTGGGCCCGGTGTACGGCGTGCAAT 2913 Query 1071 GGCGGCACTGGCATGTCGAGGACGGAGGATCGTCGTGGATTGACCAGATC---TCGGCCG 1127 |||| |||| ||| | || | | | | || ||||||||| |||| | Sbjct 2912 GGCGCAGTTGGCCC--CGAC--CCGATGGCGGGCAT--ATCGACCAGATCGGTTCGGTCA 2859 Query 1128 CCGTGGAGCTGCTTCGCGAGGACCCTGACTCGCGCCGGAACGTGGTATCCGCATGGAACG 1187 || ||| | | | |||| ||||||||||| | | | || ||| ||||||| Sbjct 2858 TCGCCACGCT-CAAGACCA--ACCCCGACTCGCGCCGCATCATCGTCAGCGCCTGGAACG 2802 Query 1188 TCGGTGACCTCAGCGACATGGCACTTCACCCGTGCCACATCATGTTCCAGCTGTACGTCG 1247 | | || ||| | | ||||| | || || || ||||| | || ||| | ||||| | Sbjct 2801 TGGCCGAACTCGACAAAATGGCCTTGCAGCCCTGTCACATACTCTTTCAGTTCTACGTGG 2742 Query 1248 TC-----------GACGGCCGG--------CTCTC-GCTGC-AGGTCTACCAGCGCAGCG 1286 | | ||| ||| | ||| | ||| || ||||||||||||||| Sbjct 2741 CCCCGGCGCAGACGCCGGGCGGGCGCGGCACGCTCAGTTGCCAGCTCTACCAGCGCAGCG 2682 Query 1287 CGGACATGTTCCTCGGTGTGCCGTTCAATATCGCCTCGTACGCGCTCCTCGCGCACATGT 1346 | ||||| ||||| || |||| ||||| |||||| |||||||| || | || ||| Sbjct 2681 CCGACATCTTCCTGGGCCTGCCCTTCAACATCGCCAGCTACGCGCTGCTGACCCATATGG 2622 Query 1347 TCGCGCAGCAGGCCGGCCTGCGGGTGGGTGAGCTGATCTGGACCGGCGGCGACTGCCACA 1406 | || ||||| || || ||||||||| | ||||||||||| ||||||||||| | Sbjct 2621 TGGCCCAGCAATGCGAGTTGGACGTGGGTGAGTTCATCTGGACCGGTGGCGACTGCCATA 2562 Query 1407 TCTACAACAACCACGTCGACCAGGCGCTGATGCAGCTCCGCCGACGACCGCGGCCCTACC 1466 ||||| |||||||| || |||| || || || || || | || ||||||| Sbjct 2561 TCTACGACAACCACCACGCGCAGGTGCAGACCCAACTGGCGCGCAGCCCCTATCCCTACC 2502 Query 1467 CGAGGCTCGTGCTACACCACGCGCCGTC-------GATCTTCGACTACCGGTACGAGCAC 1519 | || ||| || || |||||| | |||||||||||||| ||||| | Sbjct 2501 C---GCAGTTGC-GCATCAGGCGCCGGCCCGACAGCATCTTCGACTACCGCTACGAAGAT 2446 Query 1520 ATCCACCTCGTGAACTA-CGACCCGCACCCGTCGATCAAGGCGCCGGTGGCCGTCTGA 1576 || | | || |||| ||| | ||||| ||||||||||||| ||||| |||||| Sbjct 2445 TTCGAGGTGCTGGACTACCGATGC-CACCCCGCGATCAAGGCGCCAGTGGCGGTCTGA 2389 >seq1638728 Length=450 Score = 150 bits (166), Expect = 1e-31 Identities = 154/201 (77%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 1230 TGTTCCAGCTGTACGTCGTCGACGGCCGGCTCTCGCTGCAGGTCTACCAGCGCAGCGCGG 1289 |||||||| | ||||| | |||||| |||||| ||| |||| ||||||||||| | Sbjct 1 TGTTCCAGTTCTACGTGGCCGACGGTAAACTCTCGTGCCAGCTCTATCAGCGCAGCGCCG 60 Query 1290 ACATGTTCCTCGGTGTGCCGTTCAATATCGCCTCGTACGCGCTCCTCGCGCACATGTTCG 1349 | |||||||||| |||||||||||||| | || |||||| | ||| | |||||| ||| Sbjct 61 ATCTGTTCCTCGGGGTGCCGTTCAATATTCCGTCCTACGCGTTGCTCACCCACATGATCG 120 Query 1350 CGCAGCAGGCCGGCCTGCGGGTGGGTGAGCTGATCTGGACCGGCGGCGACTGCCACATCT 1409 |||| ||| ||| ||| || || || || | ||||||||||| |||||||| | | Sbjct 121 CGCAACAGACCGACCTCGCCGTTGGCGACCTCGTGTGGACCGGCGGTGACTGCCATGTTT 180 Query 1410 ACAACAACCACGTCGACCAGG 1430 || |||| ||| |||| |||| Sbjct 181 ACGACAATCACCTCGAACAGG 201 >seq611210 Length=716 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 887 GACCTCACCGAGGGCTTCCCGCTGGTCACCACGAAGCGCGTCCACTTCAAATCGGTTGCG 946 ||||||| || ||| ||||| | ||| || |||||||| || | ||| ||| Sbjct 235 GACCTCAGCGCGGGATTCCCCGTTACCACGACAAAGCGCGTGCATGTGGCATCAGTTATT 176 Query 947 TACGAACTTCTGTGGTTCCTCAGTGGCGACA-CGAACGTGAAGGCGCTCAACGACAACGG 1005 ||||| || ||||||||| | | || | || | || || || | | |||| |||| Sbjct 175 TACGAGCTCCTGTGGTTCTTGCGCGG-GTCATCCAATGTTGAGTGGTTGCACGAGCACGG 117 Query 1006 CGTCACCATCTGGGACGAGTGGGCCGACGCCGGCGGAAACCTCGGTCCTGTCTACGGCGC 1065 |||||||| ||||||||||||||||| || ||| | || ||||| || || || | Sbjct 116 TGTCACCATTTGGGACGAGTGGGCCGATGCATCCGGTGATCTTGGTCCGGTTTATGGTGT 57 Query 1066 GCAGTGGCG 1074 ||||||||| Sbjct 56 GCAGTGGCG 48 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 290141802763827