Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_031078.1 Length=50082 Score E Sequences producing significant alignments: (Bits) Value seq644464 345 1e-90 seq653325 141 3e-29 >seq644464 Length=2640 Score = 345 bits (382), Expect = 1e-90 Identities = 713/1049 (68%), Gaps = 14/1049 (1%) Strand=Plus/Minus Query 39006 GTGAGCACGGCCGCCATGTACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAG 39065 ||||||| || ||||| || || || || || |||| |||||| |||||||| | || Sbjct 2073 GTGAGCAATGCTGCCATATATTCTGCAGGATAATGCGCCTTCAGATACGCCGTCCAATAA 2014 Query 39066 GCGATGAGACCGTACGCCGCAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACG 39125 || | |||||| || || ||||| |||||||| || || || | | ||| || | Sbjct 2013 CTGAGCACACCGTAGGCTGCCGAGTGAGCCTTGTTAAACGCATAATCAGAGAACGGCAAC 1954 Query 39126 AGCACGTCCCACACCGCCTGGATGGCACCGTCCGAGTAGCCTCGCTCGCGCGCTCCCTTC 39185 || | |||||||| | || | || | || || | || | | || | || | Sbjct 1953 AGGATGTCCCACAGTGTCTTTACTGCGTCTTCAGAAAAACCATTCGTG-GCCATACCGGC 1895 Query 39186 TGGAAGTTCA-CGAACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATGGCTCGGCG 39244 || || ||| || ||| || | || | || ||| ||||| ||||| || || || Sbjct 1894 TGCAAAATCAGCGTACTGTTTATCGAGCTCTTCTTTCTTTTTCTTTCCCATTGCGCGCCG 1835 Query 39245 GAGAAGGTCGGCCTGACCCAGGCTGTACCCAGCGAGGATCTGTGC---CGCCTTCTGCAC 39301 |||| || || || || || | | || || | |||||| |||| | || Sbjct 1834 CAGAATATCAGCTTGGCCGAGTGAGAATCCCGCTACCCGCTGTGCAATCGCCATA---AC 1778 Query 39302 CTGCTCCTGGTAGATGACCAGCCCGTAGGTCGGCCCCAGGATCTCG-GCAAGCGGCTCCT 39360 ||| |||||||| |||| ||||||||||| | ||||||| || |||| ||||||| Sbjct 1777 CTGTTCCTGGTAAATGATGAGCCCGTAGGTGGTATCCAGGATGTCTCGCAA-CGGCTCCG 1719 Query 39361 CCACCTCGGGGTGGATCGGCGTGATCGCCTGCTGCCCGTTCTTGCGGAGGGCGTAGTTCG 39420 ||| ||||| || ||||||||| | | || ||||| |||||||| || |||||||||| Sbjct 1718 CCAGTTCGGGATGAATCGGCGTGTTTTCTTGTTGCCCATTCTTGCGCAGCGCGTAGTTCG 1659 Query 39421 TGTGCGAGCCCACGCCCATCGGACCCGGACGGTACAGCGCGACGACGGCGCTGATGTCCT 39480 |||| || | | |||||||||||||| ||||||| ||||| || ||| ||||||| Sbjct 1658 TGTGTGAATTCGCCCCCATCGGACCCGGTCGGTACAACGCGATAACCGCGGAAATGTCCT 1599 Query 39481 CGAAGTTGTCCGGCTTCAGCAGGCGGAGCAGTGAGCGCATCGCGCCGCCGTCGAGCTGGA 39540 ||||| ||||||| |||| || || ||||||| ||||||| |||||||||||||||| Sbjct 1598 CGAAGGTGTCCGGTTTCAACAATCGCAGCAGTGCCCGCATCGGACCGCCGTCGAGCTGGA 1539 Query 39541 AGACCGAGAGCGTGTCGCCCCTGGCCAGCAGCTCGTAGGTAGCAACGTCGTCCAGCGGGA 39600 | || ||| ||||| |||| ||| |||||| |||||| | ||| ||||| | | Sbjct 1538 ATACGCCGAGTGTGTCACCCCGGGCGAGCAGCGCGTAGGCGTCCGGGTCATCCAGTGCCA 1479 Query 39601 TGTTCTCCAGGTCGACGTGCTCCCCACGGTTGGCGCGGATGTTCTCGACCGCGTCGCCCA 39660 | ||||| || |||| | ||||||| | | || |||| |||||| | | Sbjct 1478 GCTCTTCCAGCACGGGTCGCTCGCTGCGGTTGGAGGCAACATTGTCGAGCGCGTCATCGA 1419 Query 39661 TGATCGTGAGGTTCCGGAGCCCGAGGAAGTCCATCTTCACCGCGCCCAGGCTCTCGCACT 39720 | ||||||||||| || |||||||| ||||||||||||| ||| || ||||||| Sbjct 1418 TAATCGTGAGGTTTCGCAGCCCGAGAAAGTCCATCTTCATAAGGCCGAGCGCCTCGCACG 1359 Query 39721 GGGGGTAGTCCCACTGCGTCACGGTCACGCCGTCCGCAGGGCGGACCCACACCGGGAGGT 39780 || |||| |||| || ||| | ||||||| || | | ||||| | Sbjct 1358 ACGGAAAGTCAAACTGGGTGACGATTTGGCCGTCCTGTTCCCGTTTCATAATCGGGATGA 1299 Query 39781 GATCGACCAACGGCTCGTTGGACATGATCACACCGGCCGCGTGAACGCCCATCTGCCGGA 39840 || | | ||| || | |||||||| |||||||||||||| || ||| ||| || Sbjct 1298 TGTCAATGAGCGGATCACTCGACATGATGACACCGGCCGCGTGCACACCCCACTGTCGCT 1239 Query 39841 CGAGACCTTCGAGCCCGAGCGCAGTGTCGATGACCTGCTTCGAGTCCGGGTCGTTCTCGT 39900 || ||| | ||| | || ||||| | ||| ||| | |||| | | ||| Sbjct 1238 TAAGGTTTTCTAACCCAACGGCGGTGTCAAACACCGTCTTGGCATCCGAATTTTCCTCAA 1179 Query 39901 ACAGCCCACGGATCTCGCCCGCCTCGTCGTAGCGCGGGTGCTCCGGGTTGAAGATGCCCT 39960 ||| || || |||||||| || | || | || |||||||| | || || ||| Sbjct 1178 TAAGCTGCCGAATATCGCCCGCTTCTTTATATCTGGGATGCTCCGGAGTAAAAATACCCG 1119 Query 39961 CCAGGGGCATCGAGTTG-CCCATCA-CGTCGGCCGGGTACGCCTTGGTCAGCTTCTCGCC 40018 || |||| || ||| ||||||| || ||| | || ||||| |||| |||||| Sbjct 1118 AGAGTGGCA-CGTCTTGCCCCATCACCGCCGGAGGCATA-GCCTTTGTCAATGCCTCGCC 1061 Query 40019 GACCTGGAAGGGCTTGTCCAGCACGCGCG 40047 | | |||| | ||||||| |||| Sbjct 1060 CATTCCGTAGGGGAAGCCCAGCACACGCG 1032 Score = 141 bits (156), Expect = 3e-29 Identities = 191/266 (72%), Gaps = 0/266 (0%) Strand=Plus/Minus Query 40140 ATCACGTCGCCCCGTCGCCGGTCATCGAAGTCGATGTCAACGTCGGGCATGGACACGCGC 40199 || || || |||||||| || || || || |||| || | ||||||||| || || || Sbjct 993 ATAACCTCACCCCGTCGGCGCTCGTCAAAATCGACATCGAAGTCGGGCATTGAGACACGA 934 Query 40200 TCGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCGGGATGGGGTCCAGGTCTGTGATG 40259 || ||||| ||||| || ||||||||||| ||||| | ||||| ||||| ||||| Sbjct 933 TCCGGGTTGAGGAAGCGTTCGAAGATGAGACCGTGTTCAAGCGGGTCGAGGTCAGTGATC 874 Query 40260 CCGAGGCAGTAGGCGACCAGCGAACCGGCAGCCGAGCCACGTCCGGGTCCGACCCACACG 40319 | | | ||| ||| ||| ||||||||| | || || || || || || || | | Sbjct 873 CGCATGGCGTACGCGGCCATTGAACCGGCACCAGACCCGCGGCCCGGGCCCACTCGAATT 814 Query 40320 CCGTTCTCCTTGGCCCAGCCGATGAAGTCGGCGACGACCAGGAAGTAGGACGGGAACCCC 40379 || || | ||| | |||| ||||| || ||||| || ||||||||| ||||||||| Sbjct 813 CCATTGTTCTTCGACCAGTTAATGAAATCCGCGACAACGAGGAAGTAGCCGGGGAACCCC 754 Query 40380 AGCTGGATGATCATGTCGATCTCGTA 40405 | ||| |||| | || | |||||| Sbjct 753 ATCTGAGTGATGACCTCAACCTCGTA 728 >seq653325 Length=6560 Score = 141 bits (156), Expect = 3e-29 Identities = 231/328 (70%), Gaps = 6/328 (2%) Strand=Plus/Minus Query 40083 CCGAAGGTCCCGATCTGTGCGACCTTGTCCGCCCCGTACTTCTCGGTGACGTACCTGATC 40142 |||||||| ||||||| || |||| |||||||| || ||||||| |||| Sbjct 1148 CCGAAGGTGGCGATCTGGCTCACGGCGTCCTTGCCGTACTTGTCCTTGACGTAATCGATC 1089 Query 40143 ACGTCGCCCCG--TCGCCGGTCATCGAAGTCGATGTCAACGTCGGGCATGGACACGCGCT 40200 ||| | | || | ||| | || || |||||||| | ||| ||||| || || || | Sbjct 1088 ACGCGGTCGCGGTTGGCCTGGCAA--AAATCGATGTCGAAGTCCGGCATCGATACCCGTT 1031 Query 40201 CGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCGGGATGGGGTCCAGGTCTGTGATGC 40260 ||||||||||||| |||||||| | || || | ||||| ||||| ||||| | Sbjct 1030 CGGGGTTCAGGAAGCGCTCGAACAGCAGTTTGTATTCCAGCGGGTCGAGGTCGGTGATCC 971 Query 40261 CGA-GGCAGTAGGCGACCAGCGAACCGGCAGCCGAGCCACGTCCGGGTCCGACCCACACG 40319 | | |||| ||||| |||||||| ||||| | || || || || || |||||| | Sbjct 970 CCATGGCA-TAGGCCACCAGCGAGCCGGCGCCGGAACCGCGCCCCGGCCCGACCGGGCAG 912 Query 40320 CCGTTCTCCTTGGCCCAGCCGATGAAGTCGGCGACGACCAGGAAGTAGGACGGGAACCCC 40379 || || | | ||||||| |||||||| |||||| |||||||||| || || ||| Sbjct 911 CCATTGTTCCTGGCCCACTGTATGAAGTCCCCGACGATCAGGAAGTAGCCCGCAAAGCCC 852 Query 40380 AGCTGGATGATCATGTCGATCTCGTACT 40407 | || || ||| | |||||||| ||| Sbjct 851 ATCTCGACGATGGTCCCGATCTCGAACT 824 Score = 140 bits (154), Expect = 1e-28 Identities = 219/310 (71%), Gaps = 4/310 (1%) Strand=Plus/Minus Query 39025 ACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGACCGTACGCCG 39084 ||||||||| ||| ||| |||||| | ||||| ||||||| | || ||| || | Sbjct 2209 ACTCGGCCGTGTAATGCACCTTCAGCCAGCCCGTGTGGTAGGCCAGCAGGGAGTAAGCGG 2150 Query 39085 CAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCCCACACCGCCT 39144 ||| ||||| |||||||||| |||| ||||| || | | || ||| ||||| | | Sbjct 2149 CAGCGTGCGACTTGTTGAAGCCGTAGCCGGCAAACTTCTCCATCAGGTCGAACACCTCGT 2090 Query 39145 -GGATGGCACC-GTCCGAGTAGCCTCGCTCGCGCGCTCCCTTCTGGAAGTTCACGAACTC 39202 || | | || | | |||| ||| || ||| ||||| ||||| | || | Sbjct 2089 CGGCTTTCTCCTGGCTGAGT--CCTTTTTCCGCCGCCCCCTTGCGGAAGATGGCGCGGTG 2032 Query 39203 CTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATGGCTCGGCGGAGAAGGTCGGCCTGACC 39262 || ||||| |||||| || |||||||||||||| ||||| || | |||||| || Sbjct 2031 CTCGGCCATCTCCTCGGCTTTTTTCTTGCCCATGGCCCGGCGCAGCATGTCGGCGCCGCC 1972 Query 39263 CAGGCTGTACCCAGCGAGGATCTGTGCCGCCTTCTGCACCTGCTCCTGGTAGATGACCAG 39322 ||||||||| || |||| | ||| || | || | ||||||||||||||||| | | Sbjct 1971 CAGGCTGTAGCCGCCGAGCAACTGGGCGGTCTGCATCACCTGCTCCTGGTAGACCATGAT 1912 Query 39323 CCCGTAGGTC 39332 |||||||||| Sbjct 1911 CCCGTAGGTC 1902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156984923970856