Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_031080.1 Length=160985 Score E Sequences producing significant alignments: (Bits) Value seq653325 86.0 6e-12 seq1657888 82.4 8e-11 >seq653325 Length=6560 Score = 86.0 bits (94), Expect = 6e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 120458 TGCCTGTGCGGGCCGGGCCGTGGATCCGCCGGAGGCTCGCTGGTCACCTACGTCATGGGC 120517 |||| | ||||||||| || || |||| || ||||||||||| |||| | |||||| Sbjct 913 TGCCCGGTCGGGCCGGGGCGCGGTTCCGGCGCCGGCTCGCTGGTGGCCTATGCCATGGGG 972 Query 120518 ATCACCTCGATCGATCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGAT 120577 |||||| |||| ||| | | ||| | ||| |||||||||||||| | ||||| || Sbjct 973 ATCACCGACCTCGACCCGCTGGAATACAAACTGCTGTTCGAGCGCTTCCTGAACCCCGAA 1032 Query 120578 CG 120579 || Sbjct 1033 CG 1034 >seq1657888 Length=995 Score = 82.4 bits (90), Expect = 8e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 95715 CGGGGTGTAGTTCAGTTTGGAAGAGCGCTTGGTTTGGGACCAAGATGTCGCAGGTTCGAA 95774 ||||| |||| |||| |||| ||||||| | ||||||| | || |||||||||||||| Sbjct 779 CGGGGCGTAGCTCAGCTTGGTAGAGCGCCCGCTTTGGGAGCGGGAAGTCGCAGGTTCGAA 838 Query 95775 TCCTGTCACCCCGAC 95789 ||||||| ||||||| Sbjct 839 TCCTGTCGCCCCGAC 853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 504340297079400