Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_031107.1 Length=246291 Score E Sequences producing significant alignments: (Bits) Value seq529136 183 5e-41 seq1638728 123 4e-23 seq655988 105 1e-17 seq1652723 84.2 3e-11 seq487186 84.2 3e-11 >seq529136 Length=3526 Score = 183 bits (202), Expect = 5e-41 Identities = 210/281 (75%), Gaps = 1/281 (0%) Strand=Plus/Plus Query 201828 aaaaCGGGGATGTAAAAGCCGACCGTACCGGTACGGGCACCCTCTCTGTTTTCGGACGCC 201887 ||||||| | | |||||| || || || || || || || | |||| |||| ||| | | Sbjct 105 AAAACGGCGCCGGAAAAGCGGATCGAACGGGAACCGGAACGCGCTCTCTTTTTGGAAGAC 164 Query 201888 AGATGCGCTTTAACTTACAAGAAGGTTTTCCGCTGGTCACCACCAAAAAGGTTCACCTTC 201947 || |||| || || || |||||||| ||||| || | ||||| ||||| | || || | Sbjct 165 AGTTGCGTTTCAATTTGCAAGAAGGGTTTCCTTTGATGACCACAAAAAAACTGCATCTGC 224 Query 201948 GTTCAATCATCCATGAGCTGCTGTGGTTCCTCATGGGTGACACCAACATCCAGTATTTGA 202007 | || ||||| |||||| |||||||||| | | || |||||||| || | ||||| | Sbjct 225 GCTCGATCATACATGAGTTGCTGTGGTTTTTGAAAGGGGACACCAATATTAAATATTTAA 284 Query 202008 AAGACAACAACGTCACCATCTGGGACGAATGGGCGGATAAAAACGGTGACTTAGGCCCGG 202067 |||||||| ||| | ||||||||||||||||||||| |||| || || || || |||| Sbjct 285 AAGACAACGGCGTTTCTATCTGGGACGAATGGGCGGATGAAAAGGGAGAGTTGGGGCCGG 344 Query 202068 TGTACGGTAAGCAATGGCGTAGCTGGATTGCACAC-ACGGA 202107 | || || | || ||| | |||||| |||| | | ||||| Sbjct 345 TCTATGGGAGTCAGTGGAGAAGCTGGCTTGCTCCCGACGGA 385 >seq1638728 Length=450 Score = 123 bits (136), Expect = 4e-23 Identities = 188/268 (70%), Gaps = 0/268 (0%) Strand=Plus/Plus Query 202490 CTTTCTTGTCAGCTCTATCAGCGTAGTGCGGACATGTTCCTTGGCGTACCGTTTAACATC 202549 || || || |||||||||||||| || || || ||||||| || || ||||| || || Sbjct 30 CTCTCGTGCCAGCTCTATCAGCGCAGCGCCGATCTGTTCCTCGGGGTGCCGTTCAATATT 89 Query 202550 GCGTCTTACGCCTTGCTGGTACACATGTTTGCACAACAGGCGAACATGGCGGTAGGCGAC 202609 |||| ||||| ||||| |||||| | || |||||| | || | || || |||||| Sbjct 90 CCGTCCTACGCGTTGCTCACCCACATGATCGCGCAACAGACCGACCTCGCCGTTGGCGAC 149 Query 202610 TTCGTCTGGACAGGTGGTGATACGCATCTGTACTCCAACCATCTGGAACAAGCTGACCTC 202669 |||| ||||| || ||||| ||| | ||| ||| || || ||||| | |||||| Sbjct 150 CTCGTGTGGACCGGCGGTGACTGCCATGTTTACGACAATCACCTCGAACAGGTTGACCTG 209 Query 202670 CAACTTACCCGTGACCCTAAACCGTTACCGAAGTTGGTTATCAAACGTAAGCCCGATTCC 202729 ||| | | ||||| || || | || | | || ||| || || || | || Sbjct 210 CAATTGAGTCGTGAACCGTTCCCCGTGCCCAGGCTGCACATCGTGCGGAAACCGGCCTCT 269 Query 202730 ATCTTCGACTACAAATTCGAAGACTTCG 202757 |||||||| ||| | || |||||||||| Sbjct 270 ATCTTCGATTACGAGTTTGAAGACTTCG 297 >seq655988 Length=4118 Score = 105 bits (116), Expect = 1e-17 Identities = 171/246 (70%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 201848 GACCGTACCGGTACGGGCACCCTCTCTGTTTTCGGACGCCAGATGCGCTTTAACTTACAA 201907 ||||| ||||| || |||||| | ||||| | ||||||||||||| | | | Sbjct 3147 GACCGCACCGGCACCGGCACCAAAAGCCTGTTCGGCCACCAGATGCGCTTTGATCTGCGC 3088 Query 201908 GAAGGTTTTCCGCTGGTCACCACCAAAAAGGTTCACCTTCGTTCAATCATCCATGAGCTG 201967 | || ||||||||||||||||| || || || ||||| || |||||| | || ||| Sbjct 3087 GGGGGCTTTCCGCTGGTCACCACGAAGAAAGTGCACCTCAAATCCATCATCGAAGAACTG 3028 Query 201968 CTGTGGTTCCTCATGGGTGACACCAACATCCAGTATTTGAAAGACAACAACGTCACCATC 202027 |||||||||||| || ||||| || | || | | | |||| ||| Sbjct 3027 CTGTGGTTCCTCGCCGGCTCGGGCAACAACCGCTGGCTGCAGCAGCGCGGTGTCAGCATT 2968 Query 202028 TGGGACGAATGGGCGGATAAAAACGGTGACTTAGGCCCGGTGTACGGTAAGCAATGGCGT 202087 ||||||||||||||| | |||| || | |||||||||||||| ||||||||| Sbjct 2967 TGGGACGAATGGGCGCGCGCAGACGGCGATCTGGGCCCGGTGTACGGCGTGCAATGGCGC 2908 Query 202088 AGCTGG 202093 || ||| Sbjct 2907 AGTTGG 2902 Score = 100 bits (110), Expect = 4e-16 Identities = 217/320 (68%), Gaps = 6/320 (2%) Strand=Plus/Minus Query 202495 TTGTCAGCTCTATCAGCGTAGTGCGGACATGTTCCTTGGCGTACCGTTTAACATCGCGTC 202554 ||| |||||||| ||||| || || ||||| ||||| ||| | || || |||||||| Sbjct 2704 TTGCCAGCTCTACCAGCGCAGCGCCGACATCTTCCTGGGCCTGCCCTTCAACATCGCCAG 2645 Query 202555 TTACGCCTTGCTGGTACACATGTTTGCACAACAG-GCGAACATGGCGGTAGGCGACTTCG 202613 ||||| ||||| || ||| | || || || |||| ||| || || || ||| Sbjct 2644 CTACGCGCTGCTGACCCATATGGTGGCCCAGCAATGCGAGT-TGGACGTGGGTGAGTTCA 2586 Query 202614 TCTGGACAGGTGGTGATACGCATCTGTACTCCAACCATCTGGAACAAG--CTGACCTCCA 202671 ||||||| ||||| || ||| | ||| |||||| | | || | | |||| || Sbjct 2585 TCTGGACCGGTGGCGACTGCCATATCTACGACAACCACCACGCGCAGGTGCAGACC--CA 2528 Query 202672 ACTTACCCGTGACCCTAAACCGTTACCGAAGTTGGTTATCAAACGTAAGCCCGATTCCAT 202731 ||| | || ||| | || | ||| ||||| |||| || |||||| ||| Sbjct 2527 ACTGGCGCGCAGCCCCTATCCCTACCCGCAGTTGCGCATCAGGCGCCGGCCCGACAGCAT 2468 Query 202732 CTTCGACTACAAATTCGAAGACTTCGAGGTTGTCGATTACATTTCGCATCCGGCGATTAA 202791 |||||||||| | |||||| |||||||| | || ||| | || || ||||| || Sbjct 2467 CTTCGACTACCGCTACGAAGATTTCGAGGTGCTGGACTACCGATGCCACCCCGCGATCAA 2408 Query 202792 AGCGCCCGTCGCGATCTAAC 202811 ||||| || ||| ||| || Sbjct 2407 GGCGCCAGTGGCGGTCTGAC 2388 >seq1652723 Length=654 Score = 84.2 bits (92), Expect = 3e-11 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 3485 ACGTATTGGCGCGGTACTCAAGCGGTCAACGAGAGCAGACTGTAAATCTGTTGCCTTCGG 3544 ||| ||||| | | ||||||||||| ||||||| |||||||||||||||||| ||| | Sbjct 269 ACGGATTGGGGAGATACTCAAGCGGCCAACGAGGACAGACTGTAAATCTGTTGACTTTTG 210 Query 3545 GCTTCGTAGGTTCAAATCCTTCCCTCGCCAC 3575 |||| |||||| |||||| ||| |||| Sbjct 209 TCTTCACAGGTTCGAATCCTGTTCTCCCCAC 179 >seq487186 Length=932 Score = 84.2 bits (92), Expect = 3e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 624 TCAACTGGTAGAGCGTCGGTCTCCAAAACCGAATGTTGCAGGTTCGAGTCCTGTCTCCCC 683 |||| ||||||||| ||||||||||||||| | ||||||||||||||||||||| ||| Sbjct 57 TCAATTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCGAGTCCTGTCCGCCC 116 Query 684 TGCCAA 689 ||| || Sbjct 117 TGCGAA 122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 771656792668920